| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46423 |
|---|
| Symbol | |
|---|
| ID | 7201784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011678 |
|---|
| Strand | + |
|---|
| Start bp | 289125 |
|---|
| End bp | 291010 |
|---|
| Gene Length | 1886 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180794 |
|---|
| Protein GI | 219120096 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGTGCTAGCT ACAACCAGAT CGCCGGACCC ATAAGTTGGA CTGACGGTGA TTGCTTGGCT
GTGACCCAAT ACCTCCGAGA TTGTTGTAGC ATTAGACGTC TTTTGAAGAA GCAGGCAACA
TGGTGAGTAC AGGATGCGGA GAAAAAGACA AACAGGAAGA AGCACAGCAA AGGCTTGACA
GTGAGTGGAT CTAGAACAGA GTTATTCTGC AAACAGAAGC AGTCGTGTCT AAGAGATCGA
TAAGAACTCT AGTACGATGA TTTGTGTTGG ATCTTTCCTG CACTCACAGT TACATCTATG
GGTATTTCTC CTCCTTTCTT TCATTACAGG GTGCCGCGAT TAGCTCCACA CTGACCATGT
GTTTGACGTA CACTTGTTGT AGTGCCACGA ATTCCTTATG CAACGCCTGT CTCGGCTCCA
CTTCGGAAAA TTCGACGGGT CGAAAACGCA GTGTTTTGCT CCTGACCTTG GCGGTAGCCA
TAGCCTTGTG GTTCCAGTAC GATGTCGGTC CAGCTATTGT CACCAAGTCG GGGTGGGTCT
GGAAAGCTTT TCAGTGGATC CCGGGATTCG GGAAAATGCT CTACCACGCA TGGTACGATT
CCTGTGAAGT CTACAAGGAC AATGATGCTC TCTTGCAGCA GTGTGCGGGT AACGCCGGCG
TGTATCGACC AACATTCGTG GCGAGTTTGT TTTTTGCCGT CTTGGCAATT GTCACCAAAG
TGGAACCGTA TCTCAACAAG GAAGTTTGGC CTGCGAAGTA CGTTGTCTTT TTGTTCGCGG
TGACCATTTC CATGTTCGTT TCGTCCGCAC CGATGTTTAC CGGCTTTTAT CTGTGGTTGG
CACGGTTTGG CGCCACACTA TTTGTGCTGC TGCAACAAAT TATTCTTATT GACGTTGCGT
ACAACTGGAA CGAGGATTGG GTAGACCGTG CCGACCAGGC GGACCGAATG GACTACGGTA
GTGGCGCGAA TTGGCTGCAC GCGATTGTCG CGACCTGTGT CGCCTTTTAT GTCGCCGCCT
GCGCCGGCAT TTGGATCCTC TATCAGAACT TTACGGGCTG TCCGGAAAAC ACTTGGATCA
TCACGTTGAC AATGTTGGGA GTTTTGGGGC TAACCGCGAT TCAGCTTTCG GGGCAAGAGG
GGTCGCTGCT GACCTCCTCG GTAATGAGCC TGTATTCGGT CTATTTGGCA TACAGTATGG
TTTCCAAGAA CCCCAACGCT AGCTGCAACC CACAGCTAGG GAGCAATGAT GTCTGGAGCA
TTGTCATCGG TTTGACGCTC ACCGCCGTCA GTCTAGCTTG GACAGGCTGG TCGTGGACGG
CCGAGGAGCG CTTGAACGTT GACGGTGTTC AGTCGGCGAA ATCGGTGACG GGTGCACACC
CAATCGGCGG CAATGGTCAA ATTAATTTGG ACGTTCCGTT TTTGGATGCA GAAGATCAGC
CTCGGCAAGG CCTCGTGACA GATTCGGACG GGCCTGCCGC TCGAAGTGGC CGAGTCGCTA
ACGCGCATGT CTGGAAGCTC AACGTCGTCA TGTTGTTAAT TTCTTGCTTC GTGGCCATGA
CTCTGACAGG ATGGGGGACA ATTGAAGAAT TGGATGAAAA TGCGAATGCG GCGAATCCGA
CTGTAGGTCG GGTGAATATG GCGATGCTTG GTATTAGTCA GTGGCTGGCC ATTGGATTGT
ATGTGTGGAC GCTGCTTGCG CCGCGACTGT ATCCGGACTA CGAGTTTTCC TAGGGCGCCG
CATAACAATG GCGACCCGGT TCATGTATGA CAAGGCACAA AGACCTCCAT GCTTTTATGT
TAGACAGGCA TTTTACAATT CGATGGTGTC TTTGTTGAAG CGTTAGTCGC CTGGACTGTC
AGATTTGTTT AGGTCGACTA GCGCAT
|
|---|
| Protein sequence | MGAAISSTLT MCLTYTCCSA TNSLCNACLG STSENSTGRK RSVLLLTLAV AIALWFQYDV
GPAIVTKSGW VWKAFQWIPG FGKMLYHAWY DSCEVYKDND ALLQQCAGNA GVYRPTFVAS
LFFAVLAIVT KVEPYLNKEV WPAKYVVFLF AVTISMFVSS APMFTGFYLW LARFGATLFV
LLQQIILIDV AYNWNEDWVD RADQADRMDY GSGANWLHAI VATCVAFYVA ACAGIWILYQ
NFTGCPENTW IITLTMLGVL GLTAIQLSGQ EGSLLTSSVM SLYSVYLAYS MVSKNPNASC
NPQLGSNDVW SIVIGLTLTA VSLAWTGWSW TAEERLNVDG VQSAKSVTGA HPIGGNGQIN
LDVPFLDAED QPRQGLVTDS DGPAARSGRV ANAHVWKLNV VMLLISCFVA MTLTGWGTIE
ELDENANAAN PTVGRVNMAM LGISQWLAIG LYVWTLLAPR LYPDYEFS
|
|---|
| |