Gene PHATRDRAFT_46378 details

Gene Information

• Locus tag: PHATRDRAFT_46378
• ID: 7201760
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011678
• Strand: +
• Start bp: 154816
• End bp: 157044
• Gene Length: 2229 bp
• Protein Length: 509 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002180767
• Protein GI: 219120039

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGTTGTTTCA TTACAGACGA ATCTCCTGGC TTATCCTTAT CATAGCGACA AGCCACCTGA 
TTTAACTGTA AGTGTACACT TTAACATTAC AATCGTCGGC CTGGACAGTT CGGACAGATG 
TTGACGTTTC ACAGTCGATG GAACTTACAA CGAGCTACAA ATTCAAGGTA TATATCAACA 
AATAAACCGA GTGGTAAATA TCGTTATGCA ACGACTTGAT ACGGCCTAGG CAGCAACAAT 
CGCCCTACTT CAGTAGCTAT GCTTGAATGC AAAGTAGCCA GATGAGCTCT GGAAAGGGAC 
TCTCTATTGT GGGTTGCTCG GGATTCTGGA CAAGGTTAAA ACCATGAAAA TTCTGTACAT 
TTTCCAAGTC TAATGTGGAG AAGTCTGAAC TTTCACTGAA ACGATTGACT GTGAATGTAG 
CACCCCGTTG TTTTGCTACT TACCGATCAT GCACATTCGC AGCGGAAACT ACAAGAATGC 
CCAATAAAAT TTCTGTTTGC AATCGTGATG CGAGGTAATT CCTTGGGACG AAACTTCCGT 
CACGAAACGA CCGGTTTCGC ACCTTTATGC ATCGGAAAAA AATCAGTCCC ACCTTTTTTG 
TTTCTTCTCA AAAGATTGTG GGTCTGTATT CTGTCATAAA TTTGATTCGC ATCAGTGAAG 
CAACCAAAGC GATCTTCAAT ATCTCGTCAT TCTACAATCA TGGGGTACCT CTCTGAAATC 
ATCGTGGTCC TTCTCTCCTT GAGATCTATC GTCGCCACTG ACACCATGAA TTTGCTCATG 
GTCGGGAACA GCTACACAGC TCGAAACAAT CTTTCCCATA TGCTAAGCAG CTTGCTAGGC 
GAGGGTCTCT CATCAGACAA CATTCAAGTT TCTAGAAACA CAAAAGGCGG GGCCTCTTTG 
ACGACACATC TACAAGAAGC CGACGGTACA GCTGGAGATA CTGGGCTGCG ACAATCTCTT 
GTAAGCAATC CGAAACCGTG GGATTTTGTA GTTTTACAGG ACCAGAGCCA AATCCCCGGC 
TACTATGAGG TCAGCGGTTT CTTTGACCAA AGTCTCCAAT CAGCAGTAAA GTTGAATGAA 
CTTATCGAAG ACACAGGGGC TGAAACTATC TTTTTCTTGA CCTGGGGTCG ACGTGACGGG 
GATTCTCGCA ACCATTGGAT TTTTCCCGAT TTTCCAACGA TGCAGGAAAG GCTCATTGAA 
GGGTATCGCC AATTTGCCGA AGCGACAAGC AGTGAAACGC GGCGCACGAC TGTTGCACCC 
GTGGGGCCGG CCTTTCAAAT TATCTACGAT CGCTATCTTG AATTACGCAT GGATCCTCTG 
GATAGCGAAA GCAATTTCTA CAACCTCTAC TCATCCGATG GGAGTCATCC AAGCCGCTCC 
GGAACATATT TGGCTGCCTG CGTTCTGTAC GCCACAGTCA CAGGAAAAGA TCCTAGCGCG 
TTGAAGTATC GACCCACAGG TATCAGCAAC GACCTTCAAG ATATGCTCCA ATCTGTTGCA 
GCATTTGCTG TCATGGGGAA GTCCTTTGAT TTCGACACAG TCGTTGGCTA CATGGAACAG 
GAGATAGCTG TTTCCGAGTC CCCTTCGCCA AGCTTTTCAG GCGCTGCGCC AACTCCTCGG 
CCTACAAGGC GCCCTACTAG AGCCCCTAGT CTACGTCCCA TTAGCCCACC TCCCAAAAGT 
TGGGACGACG AGTGCTCCAG TCTTGTAGAA AACTCAAATA TGGAACTTGG TCATGAGGGC 
TTTTGGTACG CTCAAGGGGT CAGCGATGTC ATCGACACCA GCGGGTACAA GTCTGCGTTA 
GCCATTCGCT CCATCAACCG AAATCGAGAG TGGGATGGCC CGGCATACAT GATGAATTCA 
TCCAAAGACA GAAACTGTAT GGTGCAAGGA TCAACTTGGC AAATCACTGC CAGTCTTCAG 
ATGATTGATC CAAAGACAGA GCGGGGCGCG GAATGCGAAT TATCATCTGG CGGTCGCAAG 
AACGATTGCC CCGGCCTCCG TTTTAGATTT CGCGACAGCA GATGGGATTT GCAGGAGTTT 
CGCTTGCAAG AATATGCTGG TGATGCATGG AATCCCAATG GTTTTAATCA ATTCAAGGTG 
GAATTTACTG TTCCGAAAAA TTCCGACACA TGGCACGGTG AAATCCGCAA CATTGTGGTT 
TTCTTTGCAG ATTTTCCTGC TTATCTCGAC CTGGTAATTG ATGACTTCAA TATTGTCCGT 
GTGCAATAG 

 

Protein sequence

MGYLSEIIVV LLSLRSIVAT DTMNLLMVGN SYTARNNLSH MLSSLLGEGL SSDNIQVSRN 
TKGGASLTTH LQEADGTAGD TGLRQSLVSN PKPWDFVVLQ DQSQIPGYYE VSGFFDQSLQ 
SAVKLNELIE DTGAETIFFL TWGRRDGDSR NHWIFPDFPT MQERLIEGYR QFAEATSSET 
RRTTVAPVGP AFQIIYDRYL ELRMDPLDSE SNFYNLYSSD GSHPSRSGTY LAACVLYATV 
TGKDPSALKY RPTGISNDLQ DMLQSVAAFA VMGKSFDFDT VVGYMEQEIA VSESPSPSFS 
GAAPTPRPTR RPTRAPSLRP ISPPPKSWDD ECSSLVENSN MELGHEGFWY AQGVSDVIDT 
SGYKSALAIR SINRNREWDG PAYMMNSSKD RNCMVQGSTW QITASLQMID PKTERGAECE 
LSSGGRKNDC PGLRFRFRDS RWDLQEFRLQ EYAGDAWNPN GFNQFKVEFT VPKNSDTWHG 
EIRNIVVFFA DFPAYLDLVI DDFNIVRVQ