| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46361 |
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| Symbol | |
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| ID | 7201629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011678 |
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| Strand | + |
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| Start bp | 117231 |
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| End bp | 119186 |
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| Gene Length | 1956 bp |
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| Protein Length | 594 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180758 |
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| Protein GI | 219120020 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.299005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCTTTGACTG TGAATCTCAA TCGGCAAACG ACGTCTGTGG AGAAAGTGAC GGTACGAATT
CTTTCTACAT GAATAAACAG TGTTGTCGAT ACTACTAGCA AGGATCTTCT AAGCCGACAA
AGCCGGAATC AGAACTTCTC TGGTGAGACA ATTGTAGATG AGACGAAAAA AATGTCTGGA
GACTGCGTAC CACCACCCTC CACCATTTCT TTTCCGTCCG TGCCATCATC ATCGTCCCGT
TCCGATTTGG CCCCTCCTTC TTCCGCCCAT ACTCCACAAG ACGCCAATGC CATCGGCAGC
AACACACCAT CGCTCCTGTT TTCCCCGCCT CGTCAAGCAT CTTCACAATC GTTTTCCTTC
GTGACTCGCC CACGATTTTT ATACGCGACC GTTTTCGTCT GGATCAGCGT GACCGGTGGA
CGTTTTCTGG CTCCATTTTT GCGACACCAG GCCGGACTAG ATGATGGACA GATTGGAACC
GTCCTAGCTC TGCAAACACT ACTGACAACT TTGACGGGAG GATACGGGGG AGCTTGGGCC
GATCGGCGCG AAATGATGTA TCCTCATCGT GGTCGAGCGC AGGTTCTTGG TGTCGGTGTG
ACAATGGGAA CTATCTCGTT TGTGTTGCAC AGCGGCATCA ACTGGAACAT TTCTACCAGT
CGCAGTGGCT CCAGAATTAA CGACGATGGT GACGAGGGCA ACGACCACAA GTACGAAAGG
TATTTGCATT ATGCGCTGCA ATGCGGATTT GCCCTTGCCA CTTCCTTAGT TTTTCCCGTA
TTGGACGGCA TGTGTTTGGC ATATTTACAA GCTGCTGCCT TACCAAAGCA AGCCTACGGA
AGGGAGCGCT TGTACGGCGC CATTACTTGG GCGGTGACAA ATCTCTGTCT AGCACCCTTG
CTAGATTGTA TAGGATTTGT GATCCTGTAC TGGCTGAGCT GCCTTTCCTG TTTGGCCGTG
TTGGTGAGCA TAGTCGTCTA TGTACAGGCA CAACAGCAGG TTTCACGACA ACTTCTTAAG
CAAAAGAGCC AAAATATAGC AGTTGAGGAG GTGACCCACG ACGAAGATGA CGAATTTTGG
GGAGGTCGCG ATCGTATCCG CGACAGCCCA ACCGATATCG GAAATACATT CGCGGATGCG
GACAACTCCC ATTGCAGCCA AAGTTCGTCG GGTCTGCATA CAGCTAGCAC GGCTGACCGA
CGACTAACAA CGATACAATT GTGTCGATCC TTGTACGGCA CTACCTTTGG ATTCGCCTTT
TTGGTTGCCG TCCTGTCTCT CGCATCGGGA CAAGCGATCG TAGACAGTTT GAGCTTTCTA
TACTTTGAAA CTTTGGGAAG CTCGTACATG ACAATGGGAT TCATGATCTT ACTTACGGTA
GCGTTTGAAA TCCCCATTTT CCACGTTGCC CCCAAATTAT TGGAGTACGC TGGTGCTGGT
GGACTACTCT TGTTGGGTGG TGCCTGTTAC GTGACCCGCA CAATTGGATA TTCCTTCATT
CCACAAGGCA AAGTTGGATG GGTTTTGTGG TTGGAACCAC TGCACGGAAT CACGTACGCG
TGTAGTCAAA CCGCCACGGT CGACTTCGTA GCCCAGCTCT TACCAGACGC CGGTTACGAA
GCGACCGGAC AAGGTTTGGT ATCAGTGACA CGGGGTGTTG GATCAATGTT GGGATTGTGG
CTAGGTGGTA CGGCTCAAAA CATATTTGGT GCCCGCATCG TATATCGAAT TGCGTCAGCC
GTCGTCTTAA CAGGATCCAG TATTTTTGCG TTGACATTAC TCGGGATGAC CCATTCCGTA
ACCCACGTAT CTCGGAGCCA TTACATGTTG TCGCAACTCG ATGGTGATGA CGACTTGGAT
GTAGGCAAGA GCGATTTGGA ATTGACAGCG GTACAATCGA ACGACGATTC GTCCAGTCAA
AGCGAGGAAA AAAATTCGGT AGGATACAGC AAGTAG
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| Protein sequence | MSGDCVPPPS TISFPSVPSS SSRSDLAPPS SAHTPQDANA IGSNTPSLLF SPPRQASSQS
FSFVTRPRFL YATVFVWISV TGGRFLAPFL RHQAGLDDGQ IGTVLALQTL LTTLTGGYGG
AWADRREMMY PHRGRAQVLG VGVTMGTISF VLHSGINWNI STSRSGSRIN DDGDEGNDHK
YERYLHYALQ CGFALATSLV FPVLDGMCLA YLQAAALPKQ AYGRERLYGA ITWAVTNLCL
APLLDCIGFV ILYWLSCLSC LAVLVSIVVY VQAQQQVSRQ LLKQKSQNIA VEEVTHDEDD
EFWGGRDRIR DSPTDIGNTF ADADNSHCSQ SSSGLHTAST ADRRLTTIQL CRSLYGTTFG
FAFLVAVLSL ASGQAIVDSL SFLYFETLGS SYMTMGFMIL LTVAFEIPIF HVAPKLLEYA
GAGGLLLLGG ACYVTRTIGY SFIPQGKVGW VLWLEPLHGI TYACSQTATV DFVAQLLPDA
GYEATGQGLV SVTRGVGSML GLWLGGTAQN IFGARIVYRI ASAVVLTGSS IFALTLLGMT
HSVTHVSRSH YMLSQLDGDD DLDVGKSDLE LTAVQSNDDS SSQSEEKNSV GYSK
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