Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46233 |
Symbol | |
ID | 7201193 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 677775 |
End bp | 679208 |
Gene Length | 1434 bp |
Protein Length | 365 aa |
Translation table | |
GC content | 43% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180687 |
Protein GI | 219119872 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAGCC AGCGGAGACA TCTTCGTCCG GACTACGGGG ACGTTGAATA CGTTTCAACT GGTGGTGAAG TCCGAGAAAT AAAGACATAC TCATACCTTA ACAACTTGTT GGCTATCGAA AAAGAAAATT TTGATGAAAC GCCTAGCCGA AACTGCAAGT GGGCAGGTTG TCCGGATTAT CGACCTTTAA ATTGTAAGCA CTTCCTTGAC TGAACTTGGA TGACTTTTGT GCTACCTGAT GGTACTCATT CTTCTTGTTG CTCTGGACAA CTTTTAGGCA ACAGCTTTCA CGAGCTTGGG CTCAACAACG AGAACTTATC TCACCGGTCG AACTTGCTAG GGTATGTTAA AATGATTCCG AAAGAAAGAT GCTGAACAGT TTTACCTTGC TCAATAGCTG CTTTCGTACT CCAGTGAAGG TGCGTATCGA GCGGCATACA GCTTAAACCT GCACATTGGC AACTTGACAG AAACAGTTGT CTTCAAGGAA TTCAGTGAGG ATCTCAGCGA CAAGTATCTT GAATATGTTC GGATGGAAGC ATACGTCATG AGCCGTTTGG CGTCTAGTCA ATACATAGTC GATATGTACG CTTTCTGCCA CCTTTCAGTG CTCGTGGAAA ATTTCCCGCG AGGTGACATG AAAGAAAAAG CCGCTCCCTT TCTGAAGCGA AAGAACGTCA CTCTATATGA CACAGTCGAT GTCAATCCAC TAAATAAGTT TACTTTGACT CAAAAAGTAA AGTATGCTCT GGACATGGCA AGGTACGTTG ACGTTAACTG TAAAGGCTGG TGAAGATGCG AAGATCGGAA ACTAGAATGC TAAAAAGCAG AATTGCCATT TTTGCCGATT CACAGAGGTA TAGAAGCTAT GCACTCGATT GACCTAATCC ACGACGATTT GAAGCTTGCA CAGTTTCTTT TGGGGAATAA CGATCATATC AAGCTCAATG ATTTTAGTAG AACTAAAGAA CGAGTGTGGG ATCCGCTTTT GAAGCGCTTC AAAGTGTACC GGAACAGTGG CAGACATGGC GATGTAAGTT TGTACAGCGA GAGGGTACAA TTTTCTACCT AAAAATCCTC TTAATGTTCG GTATCGATTC TATATACCCC TTTGTGCAGT GTCGGTCGCC TGAAGAGTAC GCCGAAAAAG AGCTGACGGA AAAGATTGAT ATCTTCTCGC TTGGATCAAT AATGTTTAGT TTATTAACTG GTCTCATTCC GTTTGACGAG ATAACCGACG AGGAAGAGAT GATGGATAAA TTCATGGCAG GCAAACTACC TTTCATTGAT CCGCGGTATA AAAAGCGTGA TTCAATTGAA CGGAAGTTTG TCGAAGTCAT GGAGGATTGT TGGAAGTTTA AACCAGAGGA CCGGCCTACA GCCGTCGAAG TTGCTCGACG ACTAGAAGAA CTGGTCATGG AAGAATCTAT ATAG
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Protein sequence | MPSQRRHLRP DYGDVEYVST GGEVREIKTY SYLNNLLAIE KENFDETPSR NCKWAGCPDY RPLNCNSFHE LGLNNENLSH RSNLLGEGAY RAAYSLNLHI GNLTETVVFK EFSEDLSDKY LEYVRMEAYV MSRLASSQYI VDMYAFCHLS VLVENFPRGD MKEKAAPFLK RKNVTLYDTV DVNPLNKFTL TQKVKYALDM ARGIEAMHSI DLIHDDLKLA QFLLGNNDHI KLNDFSRTKE RVWDPLLKRF KVYRNSGRHG DCRSPEEYAE KELTEKIDIF SLGSIMFSLL TGLIPFDEIT DEEEMMDKFM AGKLPFIDPR YKKRDSIERK FVEVMEDCWK FKPEDRPTAV EVARRLEELV MEESI
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