| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46137 |
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| Symbol | TPS1 |
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| ID | 7201235 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011677 |
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| Strand | + |
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| Start bp | 374753 |
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| End bp | 378832 |
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| Gene Length | 4080 bp |
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| Protein Length | 1201 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | bifunctional trehalose-6-phosphate synthase |
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| Protein accession | XP_002180425 |
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| Protein GI | 219119324 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATAGCCGAAC CCACCGTCAA CGTCCAACAC CGGCAGCCCC CTTCGTATCA ATCTTACGTT
CGTTGCTTCG ATTCTCCAAC TAACTGTAAA AAAAGAAAGA TCGAACCAAT TTTTACACCG
AATCAAAGTA AGAAGACGTG ATTGATCATG AGTGCCACCG ACAAGACAGC CGACTTTGAC
GTTGGGGCTG TAGCTCACGT TAATTTTCGG GTTCGCGGGG AAAGGCTAGG TCACGGAGAA
GAAGTGTTTT TGGTAGCGCA AGACGATCCA ACGATGCAAA GGGTAAGTAA TTGACGAAGG
CGGTTGTTTT CGCGCACAAT CCCAAAGATT TACAGTTAGC GGGCTTTTAG TGTTTTTACT
ACTTTTGCGG TAGTCCTGGT GGAATATCCT CTCACAAACG CAAGCACACA TACATCCTGA
CGTTGCCCGG GCGATCGGGT CCAATTTGAA CGTTTGGAGT CATTGTCAAC CTCAATTTGC
TTGTTTGGTT TACTATAGGC CATTCCTCTC TACACTTCCG CGACTCAATT TCCCTGGTAT
CATTCCGTGT CACCAATTAC GCTTCCTTTG CCGCTCCGGG CTCTGGAACG TGAACCTCGT
AAACAAGGAA ACTTTGTCTA TCGCTACGCC ATTCACCGTG CGGGTATCTT TCATCATTGG
GAAGATACTA CCGATGCTCC GGAAGATTTG CAAGCCGCCA AGTCCTTGAG ATTGAGCGCG
AGCACTTCCG CTCAGAGCTT GCCCGTCACG GAAGACGATC TTACCGTCCC CCACAACAGC
CCTCATCACG AAGTGCCCCT ACATCTGATG CACAATCACG AATCGTACGT GGTGAACGAC
GTGCTGGGAT TAACCAACAC CAAGCCGGAA ATTGATCACA TTCGGGCCGA TACGCAGCCG
ACCTACACAC GGGCGTCGAC GTTGCACGCC CGGGGGCTCA GTCAAGACAT GTCCGCCAAG
GGTAGTGCCG GTCAGCTGGT TGGGCCATCC CCCGGACCGT CCAAGACGCG CAAAAAAGCC
GTCGGATTTG CTCCTCCTCC CCAGTCCTAT CATCAACGCA CTGCTCAGCA AGCCAATATG
AAACAATCCG TAAACTTGAA TTCGACGGAT GGATTGGTTG TGGTCAGTGC CTTTCTTCCA
GTTGTACTCC ACCGTACCGA CGAGGGAAAG TGGACGGCTG ATTGGGACTA CGAAATGCTC
TTGTCCATGC ACACTCACTT GCGTGTCATC CGTGTTGGTG TCGTCAAATG GCGAGGCTGG
CACGGCCGAT CCGGGAAAAA TGGAAGTCCC GAAAATGGTG TTCCACGGAG TGAACGGAAG
CTTGTGGAAG AGTGCTTACA GAATTTTGAC TGCGTACCGG TCTGGATCGA GCCACTGTTG
TTTGGTGAGT TCTATAACGG CTTTTGTAAG GGTGTGCTTT GGCCTGTCGT GCACAATGTT
ACGTCAGTTT ACTCCAATCG TCCGGAAGAC AACGAAATAT TCTCCGGTCA ACGGGTAGTG
CAAGATAAAA CGCAGTTTTC GGAATACAGT ATGGATGATG TGGAACAAGG ACCGGTGCAC
GGCGGTCGGG GACGCGAGGC CGCGTTATGG TCGGCGTACA ATACCGTCAA TCGCCAGTTT
GCTGATGTGG TGGTTCAATG CTTCAACGGA CACGAATTGG TTTGGATTCA TGGCTTTCAT
CTCTTGATTC TGCCGTCCTA CTTGACACGA CGCATCCCGA TGGCCAAAGT TGGTATCTTC
TTACATACAC CCTTTCCGAG TTCGGAGATC TTCCGAACTC TATGGTGCCG TGAAGATCTG
CTGCGCGGCA TGTTGAACGC CGACCAAGTT GGCTTCCACT TGTTTGAATA CGCTCGACAT
TTTCTGACAT CTTGTCGCCG ACTACTGGGT CTTAATTATG GGATGATCCC TGACGCCTCC
GGTGGGCACA CTCTGGCCAT TGATACCAAC GGACGTCACG TGGCGGTGAC CAGTATTCAT
GCGGGCGTCG AACCGCCCGT CCTGAACCAG ATTTTGACGC ATAGCAGTAC CGTCGAAAAG
GCAGGATCCA TTCGGAATCG ATTCGAGGGT AAACACATCT TCTGCGGTAT TGACCGACTT
GAGTCTCTCA AGGGTATCCC GTTGAAACTG CTGGGACTTG AGCGCTTTCT TCGCCGTTGC
CCTGAATGGG TTGGAAAGAT TGTGCTTGTA CAAGTTGGCA TCTCGGCGTT TGAACGTGGA
GATGATTACT CTATTACTAA GCACGAAGTG GTGAAACTAG TGGACAAGAT TAACCAGGAA
TGGCCCGGGA CAATTCAATT TCAAGAGTGT TACGAATCAG AAATGAGACT TCAGCAACGA
ATGGCGTTGC TTCGCGCGGC CGATGTTGTC GTTGTAACCT CCATTCGTGA CGGCCTCAAT
CTATTGCCAC TCGAGTTTAC AACGGCACAT CAAGACGCCA TGACGGAAAT GGGCAGAAAG
GATGGTCGTA AGCGTGGTTT GTGCATACTG TCCGAATTCA CTAGCTGTAC ACGGGTTATG
CGTGGGGCGC TGCACGTAAA TCCTTGGAAA ATTTCCGAAA TCGCTAATGC TTTCAACACC
GTCCTTAACA TGACCGAAGA CGAGCGAATA CGACGCATTC GCATCGCCTC GGAATTTGTC
ACTCGAGTAT CGACACAACG CTGGGCTCTT GCTGTAATGC TGGATTTGAA GGGTGTCAAC
AAGAACAGTC CTGTTCAATT AGCTGGCGCC GGGCTTGGTT TGGGTTACCG TCTCCTTGGA
ATGGATTCTG GTTTCGTATC ACTTGATTCA AACACAGTCG CGCGGGCGTA TCGTACGTCT
CGTGCTCGGC TCATCCTTGT GGACTACGGT GGAACTATTG TGAGCAATGA CAATGTAAGT
TGTTTATTTT TATTGGTACG TTAGGGTTAC ATGAATATCC TCACTTTGGC TCTTTTTTGC
AGTTGGACAG CTTGACTCGA TTCCAAATGG TCCGAGAGCG TAGTGCTCGT TCGACTCCAA
GCAAGGCGGT GATCACGGCC TTGCGAGGTC TATGCGAAGA TAAGAGAAAT ACTGTTTTTG
TCGTCAGCGG AAAAGAACGC CACTCCTTGA CGTCAACACT CGGTGACATT TCTAATTTAG
GGCTTGCAGC TGAACACGGT ATGTTCATAT CGTGGCCCAC TGCGAAAACG AAGACTCGAC
GACGTTGGGA AACCCTCGTA CCAGAAACCG ACCGAACATG GAGGTCTCTT GCTATGACAA
TTATGGAAGT TTACACATCA CGAACCCACG GAAGTTATAT CGAAGAAACA GAGATGAAAG
TTCTGTGGCA ATACCGCGAT GCCGATACGG AATTCGGATC GCTTCAAGCC AAGGAACTAG
AAGATCATCT TTCCAAGTAT TTACGAAGCT TTCCGGTCGA TATTTTGCAT GGTGGGGTGG
AAGAAGGTGG ATATGTCGAA GTTCGTCCAA AAGGAGTTAA CAAGGGCGTT CTCGCTATGC
GTGTTATTAA GAGATTTCCC GAAATGGCAC AAAAAGACAA GCTTGAGTTT GCTTTGGTAT
TAGGAGACGA CCATTGCGAC GAACCGATGT TGTCGGTTAT GCGCCAAATC GGTAGACGGG
TGAAAGCCGT GCGGAGAGCT CAGCATGGCG AGCCCCCTTT ACCAGATATG CCAGCGACGA
TTCAACTTGT GGATGTGTCG TCATGCGACA ACTATCTCTC ATCAGAACTT GAAGTGTTTA
CGAGCACAGT TGGCAAAAAA CCGAGCGCAG CAGCCAACTA TCTTCACGAC GTCGACGAAG
TGCAGGAGCT ACTAGCTAGC CTCGTACGAG TTTCCACTCG TGATCCCCGA CACTTTTCCG
CGCTTGATCT TACAGCCTTC TCGAATGGAA GCTCTGGAGT CAAGAACACG CAAAGCCCGG
CGTTGGCTAA GTCCACAAGT TTGAATGAGA TTAATAAGCA AGATCCAACG GTTAGCGTCA
GCATGAATCT GGCGGCATAT TTCGAAACAA TTGAAGACAA CGAAGAAGAT CAAGAGGATG
AGTTTTTGTT CTTCTAATAG AAGAGGATAC ATTAATCACT AACATACGGA TGCATAATAG
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| Protein sequence | MSATDKTADF DVGAVAHVNF RVRGERLGHG EEVFLVAQDD PTMQRAIPLY TSATQFPWYH
SVSPITLPLP LRALEREPRK QGNFVYRYAI HRAGIFHHWE DTTDAPEDLQ AAKSLRLSAS
TSAQSLPVTE DDLTVPHNSP HHEVPLHLMH NHESYVVNDV LGLTNTKPEI DHIRADTQPT
YTRASTLHAR GLSQDMSAKG SAGQLVGPSP GPSKTRKKAV GFAPPPQSYH QRTAQQANMK
QSVNLNSTDG LVVVSAFLPV VLHRTDEGKW TADWDYEMLL SMHTHLRVIR VGVVKWRGWH
GRSGKNGSPE NGVPRSERKL VEECLQNFDC VPVWIEPLLF GEFYNGFCKG VLWPVVHNVT
SVYSNRPEDN EIFSGQRVVQ DKTQFSEYSM DDVEQGPVHG GRGREAALWS AYNTVNRQFA
DVVVQCFNGH ELVWIHGFHL LILPSYLTRR IPMAKVGIFL HTPFPSSEIF RTLWCREDLL
RGMLNADQVG FHLFEYARHF LTSCRRLLGL NYGMIPDASG GHTLAIDTNG RHVAVTSIHA
GVEPPVLNQI LTHSSTVEKA GSIRNRFEGK HIFCGIDRLE SLKGIPLKLL GLERFLRRCP
EWVGKIVLVQ VGISAFERGD DYSITKHEVV KLVDKINQEW PGTIQFQECY ESEMRLQQRM
ALLRAADVVV VTSIRDGLNL LPLEFTTAHQ DAMTEMGRKD GRKRGLCILS EFTSCTRVMR
GALHVNPWKI SEIANAFNTV LNMTEDERIR RIRIASEFVT RVSTQRWALA VMLDLKGVNK
NSPVQLAGAG LGLGYRLLGM DSGFVSLDSN TVARAYRTSR ARLILVDYGG TIVSNDNLDS
LTRFQMVRER SARSTPSKAV ITALRGLCED KRNTVFVVSG KERHSLTSTL GDISNLGLAA
EHGMFISWPT AKTKTRRRWE TLVPETDRTW RSLAMTIMEV YTSRTHGSYI EETEMKVLWQ
YRDADTEFGS LQAKELEDHL SKYLRSFPVD ILHGGVEEGG YVEVRPKGVN KGVLAMRVIK
RFPEMAQKDK LEFALVLGDD HCDEPMLSVM RQIGRRVKAV RRAQHGEPPL PDMPATIQLV
DVSSCDNYLS SELEVFTSTV GKKPSAAANY LHDVDEVQEL LASLVRVSTR DPRHFSALDL
TAFSNGSSGV KNTQSPALAK STSLNEINKQ DPTVSVSMNL AAYFETIEDN EEDQEDEFLF
F
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