Gene PHATRDRAFT_45986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45986 
Symbol 
ID7201051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp862732 
End bp865787 
Gene Length3056 bp 
Protein Length149 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180336 
Protein GI219119139 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAGTATTTAT CCACCACGCT CACGGTCAAT CCATCAATAG CCAAAAGTTT TATTTCGTAG 
AAACTACAAC TACCCTTCCT TCCGTGGCAG TTATTCTGAA TGACGAGCTC CAATAACGCT
GCCACTTTGA CTCAAGCTGA GTACGCTGCC ATATGGGAGC GCGTCGACTA CAATGGCAAC
GGTCTTTTGT CCCTGGCAGA ACTCGACAAA GCCGTGGTGG AGATTTGGCC CAATCTGAAT
CACAAGCCTG CCATTATGCG GGCTTACAAG GCCGCCGACA AAAATGACGA TGGTTTCATA
AAGAAGAACG AGTTCCGCTT CTTCGTGCGC TTCATTCACT ACTACAATGA ATTGTGGACG
AAGTTTGAAT CGATCGACGA TGATGGGGAT CGTCGATTGA CCAAATCAGA ATTCCAACAA
GCAGCTACAA TGGTAGGTTT GGATGATCCC GATGCTGTCT TTGAAGAAAT AGACTCCAAC
GACGGTGGTG TAGTTCTGTT CGATGAGTTC TGTTCCTGGA TGGCCAAGCG GGAAAACAAC
ACTGAGTAGA AAAGACGGAC CAGCTCGAAC TAGCTGAGGA ACATTCTACA CGACCGGGAA
CATCTAGGAA GTTGAATTTG GTGTGTTAGC GGAGTTACGT TGCGTTTAGC ACACACCATA
CGCATACTCT CCAGTAATTC CAAAAATTGT GTATCTATTA TTATTATTAT TATTATTCAC
ATGGACTGGC TTGGGCATGC TTCATTCCTG TAGACGACTG GCTCAACACG CCATTAAATT
GGGGCAGCGA AGCGGCTGCA CTCATCAACA CTTCCGGCTG GGTCAGGGCA ATTGGCTGAA
TTGATGGTTT TACCGAGTCA ACGTCGATGG AATGTACCTC GGCCGCTGTT TCTATTTGTA
TGTCGGCCGA TAACTCCACC ACAGTCATCA ACTTAACAGC GTCACTCCAT TCTCCGGTGG
ACGCGACGGC TGCCGAAGCC TCTAAGGTAC TCTTGCCCAA CACTTCTATG TCCATCGGCT
CGTTCGTCTC GGTTGTCGAA ATCCCACTTT CAATAGCCTC GACCTTCTCA GCGGACCTCT
CAGCAGTTTT GACCTTTTCG ATTCCCATCT CTCCGCCGTG CGACTTTGCA TTCGCAACAG
CCAGTTTTTT GTTGCTGGAC GCTTCCGACT GCATTCTTTT CTTACCATTT CCAACTTCCA
CGTAATTTCC TTCACATTCT GCGGCGCTTG CGCTATGGTC AATATTCAAT GCATTTTTCA
CAGCAGGCTG GTTTGTGGTG GCTGGTACAT TGGCCGATCC TGTGACAGTT TCCAACCGTT
TCCTATTCGG TAGGCTTCCA ATACCAACAC CGTCCGTATC TATCATTCCC GAACTCTCTG
AGGATACACT TGTCCAATTT AGCGATATTT GGTCTTTCCT CATACCCCTG TCCGTAGCAA
ATTCCGTCGC AATTGGAACC TGAACTGACG AAAAAACGAG GGCCGGAACA AGGTCAACCT
GTGGTGTGGC TACAAGGGAA GAATGGACAG CCGGAGCATG AATCGTCACA CAAGATTCAC
CATCCATATG CTGTACGGTT TCCATTATCG AGGCGGGCTT CGATTCTAGA ACTACATGTA
CTTCGGTTTG AGGGGGTCGT GGTGCAGATG CCGTTGTCTG GCTATTTGAA AAACCAAACT
CCTTCCATTC AAGACTCGCT TCCGGAATGA GAGAACAATC TTGCCCTAGC GCTTCGACAG
CATTGGTAGA ATGGGCGAGT CCAAAAGGAG GCCACATTTC TTCAGGATTA GGCGCCTTCG
AAGATACATC GTCGTCATCT GATGCATCAT CAACGTCAAC GTCGAACGTA TCGTGGAACT
TGTCCAGCTT GAGCGCACAA AGATCCGGTA CCTTCCCTGC GCATAAAGGA CACTTCCATT
CGTCCAGCGA ATCCGAATCT TTCTTGTCCA CACCAACACA CGAACCGTGA AACCAACATT
CGCACTTATC ACAACTCAGC ATGAACCGCC CATCACTAGG TCCACCGCAA AGGCAATGAC
GTGCGCCCTC GTCCTCTATG ATGGTCAGAA GACGAGGTTC CAGCGTCATC GCTAGTGGAA
TATCGTCGCC TGCGATGGCC AGATCCTTTA GCGTGTTTAG GCTAAAAGCT TTTGTTTCTC
CCGGTACAGG AGCAACAGCT TTGCATACTT TATCATTCCA CGTGACTGCC CTCTGTAACA
TCTGTTTCAT CATTCGCAAT CCCTTCTCGT CCGGTAAATG GAGACGGGAA CCCTGTTCAA
TCAATGCTTT CACTTCTGAA ACCTGTGGTT GACGAGCGAG AATTGCAGTC GCCCTGATAC
TCCAACATAA ACACATGAAC GAATTGATGA TTTCCTCAAC ATCTTTGAGG CTGAGAAGAC
CTCGATCTTT CGCTTCATCT AGAAGTAGGA CCATTGCAGG TGATAAGGTT CCGTCTAAGC
CTGGCCGGCC CCTGTCCGCT CGCTCTGATG TCGCTGGCAC GAGCACGAGA CTGCGCACAC
GAATACACCA AGTTTTCAAA GCCAACACAT GTGCATCTTC AAATGATTCT TGTTCTTTAC
GCCTCAAAGC CAATTCATGC AACCCGACAA GACGAGATCG GGATCGCTCC AGTGCCCGAC
GAGCCTTTTC AATCTTTGCT ACAAGGGTTT CCTTGGTCTC CGTTCTCAGC TTACTATCTG
ATATCTGACC AACACTACCC GGCGCTGTGT TACTCTCGTT TCTAGTGTTT TCACCACATT
GCTCGGCATC AATTGTAATG CTAGAGCCGT CGCTTGTCTT GTTAGCATTC TCGAGATTGC
TTTTTGTAAG GTCCTTTGCC TCCGTCGATA TAGCGTCATC CGAATGCCCT AAATTACAAA
GGATGTCTCC AGACTCACCC TCTCTCGTTT CGCATCTGGG CAGTCCCTCG ACACTGGTAT
TTGGCTGGTT TTCCAGAGAG CGTAGCTGCT CTTCAAGAGC TTCGCACTCC TTCTCAAATT
TTTCCGAGTC CTTCATTTCT TTTCGAACCT TCCGCTGATG CTTTTGAGCA ATAGTC
 
Protein sequence
MTSSNNAATL TQAEYAAIWE RVDYNGNGLL SLAELDKAVV EIWPNLNHKP AIMRAYKAAD 
KNDDGFIKKN EFRFFVRFIH YYNELWTKFE SIDDDGDRRL TKSEFQQAAT MVGLDDPDAV
FEEIDSNDGG VVLFDEFCSW MAKRENNTE