Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45986 |
Symbol | |
ID | 7201051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | - |
Start bp | 862732 |
End bp | 865787 |
Gene Length | 3056 bp |
Protein Length | 149 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180336 |
Protein GI | 219119139 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GAGTATTTAT CCACCACGCT CACGGTCAAT CCATCAATAG CCAAAAGTTT TATTTCGTAG AAACTACAAC TACCCTTCCT TCCGTGGCAG TTATTCTGAA TGACGAGCTC CAATAACGCT GCCACTTTGA CTCAAGCTGA GTACGCTGCC ATATGGGAGC GCGTCGACTA CAATGGCAAC GGTCTTTTGT CCCTGGCAGA ACTCGACAAA GCCGTGGTGG AGATTTGGCC CAATCTGAAT CACAAGCCTG CCATTATGCG GGCTTACAAG GCCGCCGACA AAAATGACGA TGGTTTCATA AAGAAGAACG AGTTCCGCTT CTTCGTGCGC TTCATTCACT ACTACAATGA ATTGTGGACG AAGTTTGAAT CGATCGACGA TGATGGGGAT CGTCGATTGA CCAAATCAGA ATTCCAACAA GCAGCTACAA TGGTAGGTTT GGATGATCCC GATGCTGTCT TTGAAGAAAT AGACTCCAAC GACGGTGGTG TAGTTCTGTT CGATGAGTTC TGTTCCTGGA TGGCCAAGCG GGAAAACAAC ACTGAGTAGA AAAGACGGAC CAGCTCGAAC TAGCTGAGGA ACATTCTACA CGACCGGGAA CATCTAGGAA GTTGAATTTG GTGTGTTAGC GGAGTTACGT TGCGTTTAGC ACACACCATA CGCATACTCT CCAGTAATTC CAAAAATTGT GTATCTATTA TTATTATTAT TATTATTCAC ATGGACTGGC TTGGGCATGC TTCATTCCTG TAGACGACTG GCTCAACACG CCATTAAATT GGGGCAGCGA AGCGGCTGCA CTCATCAACA CTTCCGGCTG GGTCAGGGCA ATTGGCTGAA TTGATGGTTT TACCGAGTCA ACGTCGATGG AATGTACCTC GGCCGCTGTT TCTATTTGTA TGTCGGCCGA TAACTCCACC ACAGTCATCA ACTTAACAGC GTCACTCCAT TCTCCGGTGG ACGCGACGGC TGCCGAAGCC TCTAAGGTAC TCTTGCCCAA CACTTCTATG TCCATCGGCT CGTTCGTCTC GGTTGTCGAA ATCCCACTTT CAATAGCCTC GACCTTCTCA GCGGACCTCT CAGCAGTTTT GACCTTTTCG ATTCCCATCT CTCCGCCGTG CGACTTTGCA TTCGCAACAG CCAGTTTTTT GTTGCTGGAC GCTTCCGACT GCATTCTTTT CTTACCATTT CCAACTTCCA CGTAATTTCC TTCACATTCT GCGGCGCTTG CGCTATGGTC AATATTCAAT GCATTTTTCA CAGCAGGCTG GTTTGTGGTG GCTGGTACAT TGGCCGATCC TGTGACAGTT TCCAACCGTT TCCTATTCGG TAGGCTTCCA ATACCAACAC CGTCCGTATC TATCATTCCC GAACTCTCTG AGGATACACT TGTCCAATTT AGCGATATTT GGTCTTTCCT CATACCCCTG TCCGTAGCAA ATTCCGTCGC AATTGGAACC TGAACTGACG AAAAAACGAG GGCCGGAACA AGGTCAACCT GTGGTGTGGC TACAAGGGAA GAATGGACAG CCGGAGCATG AATCGTCACA CAAGATTCAC CATCCATATG CTGTACGGTT TCCATTATCG AGGCGGGCTT CGATTCTAGA ACTACATGTA CTTCGGTTTG AGGGGGTCGT GGTGCAGATG CCGTTGTCTG GCTATTTGAA AAACCAAACT CCTTCCATTC AAGACTCGCT TCCGGAATGA GAGAACAATC TTGCCCTAGC GCTTCGACAG CATTGGTAGA ATGGGCGAGT CCAAAAGGAG GCCACATTTC TTCAGGATTA GGCGCCTTCG AAGATACATC GTCGTCATCT GATGCATCAT CAACGTCAAC GTCGAACGTA TCGTGGAACT TGTCCAGCTT GAGCGCACAA AGATCCGGTA CCTTCCCTGC GCATAAAGGA CACTTCCATT CGTCCAGCGA ATCCGAATCT TTCTTGTCCA CACCAACACA CGAACCGTGA AACCAACATT CGCACTTATC ACAACTCAGC ATGAACCGCC CATCACTAGG TCCACCGCAA AGGCAATGAC GTGCGCCCTC GTCCTCTATG ATGGTCAGAA GACGAGGTTC CAGCGTCATC GCTAGTGGAA TATCGTCGCC TGCGATGGCC AGATCCTTTA GCGTGTTTAG GCTAAAAGCT TTTGTTTCTC CCGGTACAGG AGCAACAGCT TTGCATACTT TATCATTCCA CGTGACTGCC CTCTGTAACA TCTGTTTCAT CATTCGCAAT CCCTTCTCGT CCGGTAAATG GAGACGGGAA CCCTGTTCAA TCAATGCTTT CACTTCTGAA ACCTGTGGTT GACGAGCGAG AATTGCAGTC GCCCTGATAC TCCAACATAA ACACATGAAC GAATTGATGA TTTCCTCAAC ATCTTTGAGG CTGAGAAGAC CTCGATCTTT CGCTTCATCT AGAAGTAGGA CCATTGCAGG TGATAAGGTT CCGTCTAAGC CTGGCCGGCC CCTGTCCGCT CGCTCTGATG TCGCTGGCAC GAGCACGAGA CTGCGCACAC GAATACACCA AGTTTTCAAA GCCAACACAT GTGCATCTTC AAATGATTCT TGTTCTTTAC GCCTCAAAGC CAATTCATGC AACCCGACAA GACGAGATCG GGATCGCTCC AGTGCCCGAC GAGCCTTTTC AATCTTTGCT ACAAGGGTTT CCTTGGTCTC CGTTCTCAGC TTACTATCTG ATATCTGACC AACACTACCC GGCGCTGTGT TACTCTCGTT TCTAGTGTTT TCACCACATT GCTCGGCATC AATTGTAATG CTAGAGCCGT CGCTTGTCTT GTTAGCATTC TCGAGATTGC TTTTTGTAAG GTCCTTTGCC TCCGTCGATA TAGCGTCATC CGAATGCCCT AAATTACAAA GGATGTCTCC AGACTCACCC TCTCTCGTTT CGCATCTGGG CAGTCCCTCG ACACTGGTAT TTGGCTGGTT TTCCAGAGAG CGTAGCTGCT CTTCAAGAGC TTCGCACTCC TTCTCAAATT TTTCCGAGTC CTTCATTTCT TTTCGAACCT TCCGCTGATG CTTTTGAGCA ATAGTC
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Protein sequence | MTSSNNAATL TQAEYAAIWE RVDYNGNGLL SLAELDKAVV EIWPNLNHKP AIMRAYKAAD KNDDGFIKKN EFRFFVRFIH YYNELWTKFE SIDDDGDRRL TKSEFQQAAT MVGLDDPDAV FEEIDSNDGG VVLFDEFCSW MAKRENNTE
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