Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45964 |
Symbol | |
ID | 7200839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | - |
Start bp | 788982 |
End bp | 790316 |
Gene Length | 1335 bp |
Protein Length | 438 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180315 |
Protein GI | 219119097 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGGCTCCACC CAACTCTAAC ATGACATCTG ATCCCAACGA ACTTGTCACA AAAAAGTCGC TCGCAATCGC TTTGTCAGCT CCAAGAGCTC CGCCTTCCGG GTCGACTCAC CGTGCTGCCA TGCTAGGCCG AGAGGTGACG GAAAATCCGT ATCACAAATC GTTGACCGAC ACGACCAGTC CTCGTCTCCA ACAACGCCTT TTCCGCCAGC TGCGCAACGC GTATCGAACC GCTGCAAGCC ATGCACCGCA TCCTCATCTG CCTTCGGCTC TGGATACTGG GGACGTCGTG ACACGTGCAC TGGGAGCGTG GCTGAGCGTG GCGTCCCAAA ATCGATTTCG TGATTCGGGA GGCTTTCGGC GTTTGGTCGA CTTCCTCGTC GTACTTTCGG CACCCGCAAT TCCACTTTCC GCGCCGTCGG CAGGCTGGAA TTTCTTGATG CTCACTAAGC AAGTAAAGAA ATTGCGGTAC GGATTGAATT CTCTGCAATA TATCGACTTC TTTCTACCTT ACGATCCTGC CGAAACGTTT ACGAACACTA GGTCAGCTCG CCGATTGATT TTCTTCGTAC ACGGTGGTGC CTGGGGAAGC GGTGAGCCAT GGATGTATCG TCTGGTGGCT GGTGCTTTTT TGGAACTAGG CTACGCCGTG GCGATTGTGG GTTACCGAAC CTACCCGGAC GGTACTGTTG TCGACCAAGT TGCTGATCTC CGGGATGCTG CGGCATTTTT AGCACAAACG CATCCTGCCT GGTGCGAACG TCAAGTCACC GTCATGGGTC ATTCCTCGGG TGCGCATATA GCCTTACTGT TTTTAGTGGA TCGCTTCATC ACGAGTACAA AGCTTTCCGT CACTGCTAAT GGTAGCGGAG ACTTCCGTAT CGATTCCTTC GTCGGGTTGT CGGGACCCTA CGATATTTCG CATCATTTCG ACTACGAAGC AAATCGCGGT GTAGAAGAAA TGTCGCCACT CAAACCGGCA AATGGATATA CTCGCCAGAG CTTTCGCACA CATTCACCGG CTCTTCGTCT CCTAGATTCT TTGGCATGCC AAGTTGAATC AAACAGGGTG ATTGACAAGC TCTTCCCCCT TTTGGTTTTA ATTCACGGTA TTGAAGATGA TACGGTACCT TTCACAGCAA CTGCTGAGGC TGGACGGATT CTGAGAAGCT GTGGAGCCCT TTGCCAAGAA ATTTACATCA CTGAGACGAG ACATCAGGAT ATGGTCATGC AGATAATGCT GGGTGGCAAG ACCCTAGATG CTGTTATTGA CTGGATTCAG TTACTACATC ACGAGTCGCC AGCACCGACG CCAATATATA AAGTACATGC AAAAA
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Protein sequence | MTSDPNELVT KKSLAIALSA PRAPPSGSTH RAAMLGREVT ENPYHKSLTD TTSPRLQQRL FRQLRNAYRT AASHAPHPHL PSALDTGDVV TRALGAWLSV ASQNRFRDSG GFRRLVDFLV VLSAPAIPLS APSAGWNFLM LTKQVKKLRY GLNSLQYIDF FLPYDPAETF TNTRSARRLI FFVHGGAWGS GEPWMYRLVA GAFLELGYAV AIVGYRTYPD GTVVDQVADL RDAAAFLAQT HPAWCERQVT VMGHSSGAHI ALLFLVDRFI TSTKLSVTAN GSGDFRIDSF VGLSGPYDIS HHFDYEANRG VEEMSPLKPA NGYTRQSFRT HSPALRLLDS LACQVESNRV IDKLFPLLVL IHGIEDDTVP FTATAEAGRI LRSCGALCQE IYITETRHQD MVMQIMLGGK TLDAVIDWIQ LLHHESPAPT PIYKVHAK
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