| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45927 |
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| Symbol | |
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| ID | 7201139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011676 |
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| Strand | + |
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| Start bp | 690262 |
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| End bp | 694518 |
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| Gene Length | 4257 bp |
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| Protein Length | 1418 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180097 |
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| Protein GI | 219118658 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.208182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCAA TAGAGGCATT GGCTTCTTCG CCGCTTGTAT GGGTGACCGT AGGAAAAACA
GAGCATGCAG CATTTCTCCT CAAGACTGGC TCGAAAGGCG CGTTCGTCAA GTGGGCATCC
ACTCTAGAAA CGGACTGGGT ACCGGAGAAT CAAGTGCAGT ATTCTTTGAC GCCGCGAAGT
CGGCGACCGC CTATCGAACC CGCTTCATGC AGCTTTTCGT CACCAAACAA GAAGCGTGGG
AAAATTGAAA AGGTTACCAA GCCAAAACCT GATGCCAACC CATCGATGTG CGCTCACGAT
GAACTACAAA GCAACATTTC CAGAACCTAT TCCCATGGAG TAGAGAATTT ACTCCTTCTG
AAATCGTCGA TCCGTCGCGC TACTACGGAA GCGAAAATCC CAAACGATGC GATACTCTCG
ATTCGTACTT CTTGCACAAG TGCAACAGCA ATTGAAGTAG CGCACAATGA GGTGACTGTT
AAAGATTCCA CTGACCCTGC AAAGGAACCA CAATACATTT CTCCACGATC CTTGCCGATT
GCGCTCAGTC TTCTAGACCC GCCGTGTCTT TGCCCTTCCG ATAGTAGTCA GCCATCAGCA
CTCGATGTTG AGACGCTGGA CGAAAACTTC ACGCTGGCTG AAATCAAAAC TTTGCGCTCA
TCTTCTTCTT TGATTTCTCA AAACGGCCTA ATGGACGAAA CTGCTCTTAT CAATGACAAT
GGCCCGGCTT TGGGCGAGGA AGAGACTGTC ACGCCAATCG ATGCGTTCGC TACAGAATAC
TCTTTATGGA ACTCCGCGTA TCTCCAGAAT TTGGCCGAAA TTTGCCATAC AATTCAGAAC
GACTTACGTT GGAGGGTGGG AAAAAGTAGG CAGCCTTTAT TTCGATGGGA AAATGGGGAC
GATCTCAGAT CTATTACAGC GCTGGCTAGA CGCTTTCGGC CGATTCCTAG ACAGACATCC
AACTCCCCTT GCAAATGTGA AATTTGTCGT AAGGAAACAA GAAGTAACGG TGCCATCTTA
AAAGCACGGA CGACAATCCA GCCGTCCGAA GGCGCATCAA AAGCCAGCGA TGCGCCACCG
GAAGATGACG ACCAATGTCG AGCGCTGTAT CTTTATTGTC GGTTGTTTTA TCGAAAAGGT
CCTTGGTTTC GCTTGGATGA CATGTTTGCC AAATATTATG CTCCAAAACA GCGACTTGGC
TCCGCGCTTG ACGGAAATGA CTCAGCTGCA GAAACGGAGA TTGCAGCCAA GGAGAATTTT
TTTAATCGCT CTCGAGGAGC CAAGATATCA AAAAGCCGCA AGTGTGACAC TGTTGACGAA
ATACTTTTTC AAAAGCACAC CGATGCGATC CAGAAACTTC TTTCAGATGT CGTGCTGCTC
CTTCGCAACG GTCTTATACG GTCATTCAAC GATGAGGAAG AATGTGGTAG GACAGTTGGT
GTTGGCGTCC TCAATGCCGA TGAACGTCTA AAAGTACTGA GCAAGCTTGG TGGCGGCAAG
AAGCGACTAA GCAAGAAAGA GCATACGGGG GTACGACAGG ATGCCAACGA AATATGGAAA
CAAATGAGCA CGCAACGATC AATGGCATCT ACAAGCTCTG CGAAAGAAGT TTCAGCAAAT
TCGCTATTGC CAGTACGTCG ACATGTTAGG ACCATTGTAC TCGAGAAGCT TTACCAATCA
TCTATCATGG CTTGTACAAA GGCGGAATAT TTGCCGCAAC ATGTCTTTGC TAAATTCAAG
GAGAAGCTAC AATCAGCTGT GAATGACCTG GTACAGAAAT TACTCTCCAT AAAGGGTTCG
GACGGGTTCT GCTTCCGGCC GCGTGAGGAA CCGACACGAA CTCTTCGGCG GGCCGTTCGA
TTGTATCTTT GTGCAACATC AGGTCCCGGT GAAATGAGAA GCGATGGGTA CAACGGTTGG
AAGAGTCTTG TTGACACCGA TGCTCAGACT CCTTTTGCTC GAATGATACC AATCCCAGGA
CTACATACGT GGAATAGTAT TGTCTATCCA GGACTCGCCT ATCGATTTGG TTTAGCTTCT
TTCTGTCTCA TGGACGCGTT TGCTCCTTTG CCAATATCTC AGGGTACCCT TGATGACACA
AGCAAAAGAA ATGTGTTTGC TAGCATCTCG CATTTTAAGG CTTGGGAGGT CTGTGCAGAG
CTTAGAGCGC ATGCTGACTA TCTATTGGAG CTGAATGAAA TGTTGCGCTA TGAGAAACGT
CGACCAGAAA GGACCGCAGT GCACGCGTCC AACAATGATA GCGTCGACAG TCTTAGCGTG
CTGACAGGCT CAGGCAGACA GGCGCTTTTG GTCGATATTT TGTCTTGCAT GAGTGTAGGT
TCTCAGCAGA AGCACTCATT GATAAACACC ATGGAACGGG ACATAGAAAG TCTTTCGTCG
TCTTTCGAAA CAGAATGTGA ATCAGTTCTA GGTTGTATAG CAATGCTAGC ATTTGAGGTA
CTTAAGCTTC GCAACGAAAC AATTCCTGAT GAGGAATACT TAAAGCTTTC TGATCGTCCT
TGGCTGCGCC ACTTGTGGTG GGAAGGTTGC TTGGCGTATA TTTTATGGGA CGTCATCCCG
ATTTTTGAGC GTAGAGGACT GTATGTACTT TCCGTTCGAT TTTTGGAAGT ACTTCTGTTC
GGGCGCGTTT CTGAAAAAGC TTCTGGGCCT GACGCCTTCT CTGTACCAAG AGTTGACCAA
GCTACGCGCT TGTCACCATT GTTGCTTTCG CGGCGAGCCA GGGGTAAAGC ATTCGACAGA
ATTATCATCG ATTTGAACCA CATACTTCGA AAGAGAGCGA AAGAGAAGCA AGTCAAAGAA
AATATGAAGC CTCCGCCAAT CGACAAATCA TGGTTGACGG AGTTCTGTGT CGCAGCTGTA
AAACGTGTTG CCCCATTGGG TTCGATTGGC TTTGCTGCCA TCAGAGGGCT TGCTAAACGC
TTACAAAGGC CTTTGTCAAA AACTATGGAG TCCCTCACCT GCTTGGAATC CGAAGTTCTT
GGACTTCGGT ACTGCAATAG TTGCAAAGAG TCGATGGTCG CGGTTGATCA CTTGAAATAT
TCAGACTGGA CACCCACGAC TGATCTTGCC GTAGCGAATG CAGTCCCAAG CGGTGAGAAG
AGCGTTGGCT CGAGATGCTT TTTTGTGGGC CATGAGGATG AAAATGATTC AGCAGGGCTG
TCCGCTTCGC TCAATGTTGA AGAACTTGCA ATGGAGTATT ACAAGACCGA CCGATTATCG
GCAAGTTGCG AGACAACATC TACTAGAGGA GGCTGGTTTG GTTACCACGA CGAGGGCGGA
CACTTGAGAG CTTTGTTTCG GTTGCTTTCC GCTGGATCTG TCCTTGGAAT GGATTGGGGA
TGCTCTGTTT TGGCTTGCTC CGCTTCGGAC AAAACAGAAT TAGCAACTGT TCACTTGTCG
CCATACCAGG GAGCTCCCTT TGACCTCCAT GTGGGATACG AATTGAATTC CTCACCAGGT
AGAGATGCTG CTGAACCATC TAGGAGTTTT TTTGCCAGGC GCCGATATCG TATCGAGTGC
TTTTTGGACA GTATGGCATC TTTGAGTGAT CAAGAACTCG CTGATCTTGT ATACGACTCA
ACAATGGCGC GCGTGGAATA TATGCAAGAT CGTCGACGTA AAGACCCTTC TCTTCTGAGA
GATTTAATGC AGCTTCGAAC CCTATCTTTC ATTGCTGCGG CATGCGGTGG AAAATTACTG
GCCGCAGCTT TTCGATGCTT CTTTTTTGAT TATCGGCATT ATAGTGGGGG ACTCCCCGAT
TGCCTTCTTT TACGCGCAAC CTACGACGAC AGTACGTTGG GCCACGTTGA TCTTGGGCAT
TGGATTGGTG AGGCCTTCGA TGCAACGAAA CAGGACGCGG AGCATCTTCA ACAAGCATTG
GCTATGCTGG CCGATAAGGA TGACGAATTT CTGGGATGCG GCAAAGTTGG AGACTCTGGA
GGCCACAGTC GATCCAAAGC TAAACGCAGG CAGCCGAGTA GCAATCGTCT GCCGGTGAAA
ATTCCATCGC TTGCTGACGT GCCCGAGAGG CTCGAGCTCT GCTGCAATGG CCGCAACATA
AAGGCGGAAT GCATGATGGT GGAGGTAAAG AGTTCAAACG ATCGCTTAGA TCCTCGTCAA
GAGGACTGGC TCAACATTTT GGATCAACAC GGCAACGCTC GTGTATGCAA GTTTGAAGAC
AGTAAGAAGG GAAAGAATAG AAAGCCGAAT TCAAGGACAT CCACTGGTTC GGCCTAG
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| Protein sequence | MASIEALASS PLVWVTVGKT EHAAFLLKTG SKGAFVKWAS TLETDWVPEN QVQYSLTPRS
RRPPIEPASC SFSSPNKKRG KIEKVTKPKP DANPSMCAHD ELQSNISRTY SHGVENLLLL
KSSIRRATTE AKIPNDAILS IRTSCTSATA IEVAHNEVTV KDSTDPAKEP QYISPRSLPI
ALSLLDPPCL CPSDSSQPSA LDVETLDENF TLAEIKTLRS SSSLISQNGL MDETALINDN
GPALGEEETV TPIDAFATEY SLWNSAYLQN LAEICHTIQN DLRWRVGKSR QPLFRWENGD
DLRSITALAR RFRPIPRQTS NSPCKCEICR KETRSNGAIL KARTTIQPSE GASKASDAPP
EDDDQCRALY LYCRLFYRKG PWFRLDDMFA KYYAPKQRLG SALDGNDSAA ETEIAAKENF
FNRSRGAKIS KSRKCDTVDE ILFQKHTDAI QKLLSDVVLL LRNGLIRSFN DEEECGRTVG
VGVLNADERL KVLSKLGGGK KRLSKKEHTG VRQDANEIWK QMSTQRSMAS TSSAKEVSAN
SLLPVRRHVR TIVLEKLYQS SIMACTKAEY LPQHVFAKFK EKLQSAVNDL VQKLLSIKGS
DGFCFRPREE PTRTLRRAVR LYLCATSGPG EMRSDGYNGW KSLVDTDAQT PFARMIPIPG
LHTWNSIVYP GLAYRFGLAS FCLMDAFAPL PISQGTLDDT SKRNVFASIS HFKAWEVCAE
LRAHADYLLE LNEMLRYEKR RPERTAVHAS NNDSVDSLSV LTGSGRQALL VDILSCMSVG
SQQKHSLINT MERDIESLSS SFETECESVL GCIAMLAFEV LKLRNETIPD EEYLKLSDRP
WLRHLWWEGC LAYILWDVIP IFERRGLYVL SVRFLEVLLF GRVSEKASGP DAFSVPRVDQ
ATRLSPLLLS RRARGKAFDR IIIDLNHILR KRAKEKQVKE NMKPPPIDKS WLTEFCVAAV
KRVAPLGSIG FAAIRGLAKR LQRPLSKTME SLTCLESEVL GLRYCNSCKE SMVAVDHLKY
SDWTPTTDLA VANAVPSGEK SVGSRCFFVG HEDENDSAGL SASLNVEELA MEYYKTDRLS
ASCETTSTRG GWFGYHDEGG HLRALFRLLS AGSVLGMDWG CSVLACSASD KTELATVHLS
PYQGAPFDLH VGYELNSSPG RDAAEPSRSF FARRRYRIEC FLDSMASLSD QELADLVYDS
TMARVEYMQD RRRKDPSLLR DLMQLRTLSF IAAACGGKLL AAAFRCFFFD YRHYSGGLPD
CLLLRATYDD STLGHVDLGH WIGEAFDATK QDAEHLQQAL AMLADKDDEF LGCGKVGDSG
GHSRSKAKRR QPSSNRLPVK IPSLADVPER LELCCNGRNI KAECMMVEVK SSNDRLDPRQ
EDWLNILDQH GNARVCKFED SKKGKNRKPN SRTSTGSA
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