Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45902 |
Symbol | |
ID | 7201125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | - |
Start bp | 616375 |
End bp | 617248 |
Gene Length | 874 bp |
Protein Length | 283 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180277 |
Protein GI | 219119021 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGCCA TGTCTTCTGC AGGACTGTTG CAACAAGCGG GGCTCGACCC GATGACGAGA GCCATTTTGA TGGGGACAAC TTTTTTGGAC AACTGCGGGG CCCAGAGTTG GAACCTGCGG CTTGTGGGAA TCACCACCAC CTTTGCGTTG TGGATGATTC GTGTCATCTT TCAGAAAAAG CGTGGTGTAG ACTGGTACGC CCTGTTGCAC GCCCTCATCA GTTCACTGGG GAGTATTCTT TGTGTTTATT TGGATCTTTT TGCAGCAGAA ACCTTGACAG GCACTCCAGA ACCACTCCGG TCTTGCCAAT GTGCCCCGCC TTTGACCAGC TTGCATCGCA TTCTACCAGC GATTACCATG GGATATTCTC TTTTTGATCT GCTGGACGGC TTGACGATTG GCATCGACTT TGCTCTGCAT GGACTGGCAA CCTTACTGAT TATGGCCTTC TTTTGTGAGC ACGACGTTCC CCATATAATT ACGCCAATGC TGCTCATGGA GGCGTCGACG CCCTTTTTGG CTATCGTCAA GGCTGATTTC TTTTCCGAAA CGGCTTCACT GTTGAATCAG ATGGGCTTTG CGCTGACTTT TTTCTCCTGC AGAATTGTAA TCGTTCCCTA CATGTGGTTA ATCCTCATGT GGACAATGAT GGAGCAAAAG TCGTCACCTC GCTACCAGGA ATGCTTCCCA AGCTATTTGT TTCCGGTCTC TTTCATTTTC GGGATGTTCT TCAATGTGTT GAATCTGTAC TGGTTCATCA AAATTGTAAA GAAGGCCCGT CGGAAGCTAC TGGGTATCGA AAAAGTACAC CACGGCAACG AGTTGAACGA GAATAAAGTA AAACGTGTCT AGAGGGCTTT TGCCAATAGA AGTC
|
Protein sequence | MTAMSSAGLL QQAGLDPMTR AILMGTTFLD NCGAQSWNLR LVGITTTFAL WMIRVIFQKK RGVDWYALLH ALISSLGSIL CVYLDLFAAE TLTGTPEPLR SCQCAPPLTS LHRILPAITM GYSLFDLLDG LTIGIDFALH GLATLLIMAF FCEHDVPHII TPMLLMEAST PFLAIVKADF FSETASLLNQ MGFALTFFSC RIVIVPYMWL ILMWTMMEQK SSPRYQECFP SYLFPVSFIF GMFFNVLNLY WFIKIVKKAR RKLLGIEKVH HGNELNENKV KRV
|
| |