Gene PHATRDRAFT_45902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45902 
Symbol 
ID7201125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp616375 
End bp617248 
Gene Length874 bp 
Protein Length283 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180277 
Protein GI219119021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCA TGTCTTCTGC AGGACTGTTG CAACAAGCGG GGCTCGACCC GATGACGAGA 
GCCATTTTGA TGGGGACAAC TTTTTTGGAC AACTGCGGGG CCCAGAGTTG GAACCTGCGG
CTTGTGGGAA TCACCACCAC CTTTGCGTTG TGGATGATTC GTGTCATCTT TCAGAAAAAG
CGTGGTGTAG ACTGGTACGC CCTGTTGCAC GCCCTCATCA GTTCACTGGG GAGTATTCTT
TGTGTTTATT TGGATCTTTT TGCAGCAGAA ACCTTGACAG GCACTCCAGA ACCACTCCGG
TCTTGCCAAT GTGCCCCGCC TTTGACCAGC TTGCATCGCA TTCTACCAGC GATTACCATG
GGATATTCTC TTTTTGATCT GCTGGACGGC TTGACGATTG GCATCGACTT TGCTCTGCAT
GGACTGGCAA CCTTACTGAT TATGGCCTTC TTTTGTGAGC ACGACGTTCC CCATATAATT
ACGCCAATGC TGCTCATGGA GGCGTCGACG CCCTTTTTGG CTATCGTCAA GGCTGATTTC
TTTTCCGAAA CGGCTTCACT GTTGAATCAG ATGGGCTTTG CGCTGACTTT TTTCTCCTGC
AGAATTGTAA TCGTTCCCTA CATGTGGTTA ATCCTCATGT GGACAATGAT GGAGCAAAAG
TCGTCACCTC GCTACCAGGA ATGCTTCCCA AGCTATTTGT TTCCGGTCTC TTTCATTTTC
GGGATGTTCT TCAATGTGTT GAATCTGTAC TGGTTCATCA AAATTGTAAA GAAGGCCCGT
CGGAAGCTAC TGGGTATCGA AAAAGTACAC CACGGCAACG AGTTGAACGA GAATAAAGTA
AAACGTGTCT AGAGGGCTTT TGCCAATAGA AGTC
 
Protein sequence
MTAMSSAGLL QQAGLDPMTR AILMGTTFLD NCGAQSWNLR LVGITTTFAL WMIRVIFQKK 
RGVDWYALLH ALISSLGSIL CVYLDLFAAE TLTGTPEPLR SCQCAPPLTS LHRILPAITM
GYSLFDLLDG LTIGIDFALH GLATLLIMAF FCEHDVPHII TPMLLMEAST PFLAIVKADF
FSETASLLNQ MGFALTFFSC RIVIVPYMWL ILMWTMMEQK SSPRYQECFP SYLFPVSFIF
GMFFNVLNLY WFIKIVKKAR RKLLGIEKVH HGNELNENKV KRV