Gene PHATRDRAFT_45894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45894 
Symbol 
ID7200986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp599097 
End bp600296 
Gene Length1200 bp 
Protein Length354 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180271 
Protein GI219119009 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAAACGTTGT CTCTCAACGG CGAACACGCT GCACAACCAA ACAAACCCCG TCCGCCGTTC 
ACGGATCGAT ACGACCTCCT CCTCCCACCC AGTATCCGGC GCCGAACCAA CCTTGCAACA
CTGAACCTCA AAGCTATGGG TAAGAAGTCA CGTAAAGGAA ACGTCCGCAC GCAAACGCAA
CGTCCAGCGG CGGGCCAGGG CAAATCCAAA CATCAAGGAT CCAGCTTGTC GGGTTCCGCG
TCCCGGGCTT CGCGAGAAGA TCTTTCGGTC GCCTTTTCCA GTGAAAATGG TACCGATGCT
GCGAATCCGA CTACGTCGAA GACGCCTGTC TTCAAGTCAA AGAAACCTAC ATCTTTACCT
AAATCTGTCA TGCTTTCTCC GGCTTCCACG GCCAACGAAA CACTCAGTCC AGACGGTTAC
GAAAACAACT TCAACTTTGA CACGAATGAG AAAGCACCGC TGCTGGATAT TCCCGTCACC
ACGACGACGA CCAACAGCGA CGTCCTAGCG GCGACCACTA ACGTGGCACC TGCCGCTACC
AGCGCTCCCG TACTCACCAC CGCTAATACC GTGCCGCCGG AACCCGCCCT GCCAACACCG
TCCACCACGA CCAAGACGGA GGTGTTACCG CCAAACCGAG TTCTGATTCT TGTCTCCCAA
CAAAGCATGA TACGCACTGT GACAACGAAC CAGCAGAATG CTGTCGTTAT GTTGCACGCG
AGCGATATTC CATTTGAGCT ATTCGATGGC TCGGATCCGA CCAACAAGGA TCGGCGCAAC
GAACTCTTTG CCTTGAGTGG TAAACGTTGC GTGTATCCGC AGTTTTTCGT GATAGAAGAA
AGCAAACCAA AACCTCGTTT CTGGGGTGAC TATGAGACCA TGGAAGTTTC CAACGAGAAT
GGAACATTGG CCGAGGATAT TTTTTCCAAA ACCACGGAAA CCGCAGAGAA ATCAAACAAC
AACAATGGTA AATCCGTGTG GGATTCCACA TTGCGAGAGC AAGTGAACAA GAGCAATCCA
GACAACAAAG CGGTGCTGGA TGTTTCTATA CACGAGGAAC ACGAGGAAGC AAGCAAGTCT
GCAGCGGGCC CAGTGTCCAA ATATGTGCCA GTTTCCACTT CTCGAGTCCT GGACTTGAGC
GCGCCAGCAC CGGACGAAGC TAAGGCCAAA CAGAAGGATT GCGAATGCGT CATTCTCTAG
 
Protein sequence
MGKKSRKGNV RTQTQRPAAG QGKSKHQGSS LSGSASRASR EDLSVAFSSE NGTDAANPTT 
SKTPVFKSKK PTSLPKSVML SPASTANETL SPDGYENNFN FDTNEKAPLL DIPVTTTTTN
SDVLAATTNV APAATSAPVL TTANTVPPEP ALPTPSTTTK TEVLPPNRVL ILVSQQSMIR
TVTTNQQNAV VMLHASDIPF ELFDGSDPTN KDRRNELFAL SGKRCVYPQF FVIEESKPKP
RFWGDYETME VSNENGTLAE DIFSKTTETA EKSNNNNGKS VWDSTLREQV NKSNPDNKAV
LDVSIHEEHE EASKSAAGPV SKYVPVSTSR VLDLSAPAPD EAKAKQKDCE CVIL