| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45835 |
|---|
| Symbol | |
|---|
| ID | 7201088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011676 |
|---|
| Strand | - |
|---|
| Start bp | 430480 |
|---|
| End bp | 435598 |
|---|
| Gene Length | 5119 bp |
|---|
| Protein Length | 1462 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002180233 |
|---|
| Protein GI | 219118933 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.720628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CAACTTGTTG TCTTTCCTCT CTTTGAACGA AAACAGCGCA TCGCATTCAC ATTTAAGCTT
CTGCTCTGAT TCCGACCAAA GAGTGGAGTG TGCAAAGCAA GGATCTCAAC CGTTCCCTAT
CTTCTGAATC TACCACCGTT GACTTTGCTC AGGTATTGAA CGGCCAGGAT GAACGAGAAA
GATCTTACAG CCGAGAACCG TGGACCTCCG AAAAAGCATG TGTGGCTCTT TCATAGCATG
GCGGCGACAC CTTGGCCTTA TATGGTTTTC TTGCCTACTG TCTTTATATT CTTGATTGCT
TTTGGATGGT ACGTTCGATT CATTCTGCTT TTCTCCGGCG AGCACGCTTT TACAAGAGCT
ACTGTCTGTC CTTTAAAATA AAAGTGTTCT TACGAAGTCA CTTCCGAATC CTTTTCTTTT
TATTTCCAGG ACTCGAGAAG ATATCATTGA AGACGAAGTC GCATCGATCT GGATTCCCAC
GAAAGGTTCC TACGCCAAGG ACTTGGATTA TGGCGCTCAG CTCGGCAGAG ATGATCTCGC
GATTTCGTCG TTCGCCGCCA TGGCCATTGC CCGCGACGGC AAGAATCTCT TTACGGAATC
TCGTTTAGAA GAGATTCGTG CCCGCATGGA AGCAGCGGAA GGCACGACGG TATGTGGTTT
GAAATGGGTT TGCAACTTCG CACGATCCAT TGTGGTTAAC TGTTGGTAGT TTCTTGGTAT
CCTCACTTCA AGTCTTTATT GCATTCTCAC TTTAGGTCAC CCACAACGGT GTCACTTACA
CGTGGCAAGA TATGTGCGCG TTGAATTCCT TTCCTTACGA ATTCCCGTGT GCCAGATTGT
CACCCATGGA TCTTTTTCAA GAAGCACGCT GGTTTTTTGA TGAGACATCC AAGATCACGT
GGTACAACGA GGTTCTGCAA AATCTGCTCG TCAAGCCCCG CATTCCTCGA TTCGGGGTCA
TGACAGAGAG CTGCGCCAGC CCAGCATCGG ATGTATGCGA CTTCATTGTG GCGTTGCGTA
CGAATCCAAC GCTAGTCGGT CAACCGGCTG AAACGGCTAA CCCTCTCTTG CTCTTTTCCG
ATATCGGCAA TATGGAAATG AGCGATCCCT GTCGCATTTG TATCGAAGAG AATTACCAAA
GTCAGATTGA GCAGTTGTTC AGTCTCGCCA AGCCTGTCTT CCAAGTCCTC AGCGCTGAAC
TGCAGCGAGC TCTGCAAGTC GGCTTTGCCA ACGATACGGA AGGGTCTGCG CAAGTTGGAG
CTATGCTATC CAAAACCGCA CAATTGGCAC AAAGTATTAC TATTGAAGAT GTCAAGGATT
TCTACCAATA CTTCGTGACA CGAGGCGTAT ATGCGTCGTT AGGAGCCCCG GCTTACATCG
CAGGATACCA GCAGCTCCTG CCCTTGATCG AGTTGTGTAA TCCAGCATTC GGCCTGACTT
GCCCCTCCAC TTCTGTCCCA AATACGACCG AAGCGGAAGC GGCTCTGCTT GCCCATGCTG
ACAATTCGTT TAGCCCGGTG TCAACTGCTG GTGCTCCGTT CCCGTTCTGG TCAGAGAGCA
ATGGTACTGG TAATCTCTTT GCTGGCTCTA ATCCTGTGTC AGGTTCTGGA GTGGATATGA
GCGGGGAAAT GCTATCTATT GTTGGATACC TAGATCTTTT GAATTTTGGT CAAGACGATT
GGAACCCCCT GTATTCTAAT GGATACTTGG ACCCTGTAAC TCCGGATCCT ACTTGGTCTG
CTTTGGTGGA GCGCAATCCA CTCTTTAATT GGTTCATGGC GAGCGTTACC GAAGCCGATC
CCGGCTTGGT TTGTGGCAAT GATGTGTTGA CTGGGACCGA CACACCAAGT CCTGAATTCA
ACGCTGCTAC TGCTGGTGCT ATGGCGCAAG CAACCTCGAG ATGGTGCACC CAGTATGATC
TACCCACCGC TGAAGAGCCT GAAGGGACAT TTACCAAGCA GCACTTTGCA CGTATGTGGT
ACGATTTGCT TATTGCATCA GATAGCTTTC TTGGTGTTAC GGAGGGAGAG GATGATCCCT
ACACGTGGAC GACAGGCCAA GGGTGCGGTT ACAATCTTGG TGGCGAGCGT GATCCTTACA
CCGGCCGGGA CGAACAAAGT ATTCTTTTCA ACGCATCTCG TGAGCTCTAC TTTATCGACG
AGGGCGAAAC TATTGGCGTA GTGTCGCGGA ACTTGCTTTT TGGAGATGTG ACCCCACGGG
TGGGGGACTA TTCGTTTGAG AACCCATTGC AAGAAGTTGG TTTGGTCCAG TCTTTATACG
CGTCACTGCG CCCACCGGGC ATTGTTGAGA GAGTGAGGAA CTGCAACCGT CCGGGTGGAG
CCGTTGATAT CTCAGTGGAA GACGCTGAGG ATATTCTCAA GCTTTACAAG GAAGAAATGG
AAAACATTTG GTCCCGAGGC TGGGATGATG ACAACGCGGG GGAGGTTCAG TTCGTTGGGT
TTTTTGATGA CAATGGTGTA ATTGGAACCA CCGGACGCAT GCTACAGCAA ATCACCTTGG
ATAATACGAC CTTGACGACA ATCTCGATTT TGCTAATTGC CCTTTTCTCG GTGCTTTTCC
TGTTCAGCCT TGATTGGGTT GAGTCTCGAG TTTTAATTAC CCTGGTCGGT GTAGCACTTG
TTGTGCTCTC TTTTTTCGCT GCCCTGGGTT TTGCAATTCT CATTGGAGTC AAGATTTCTG
TCACAATTGC ATGGACTTTA CCTTTTGTGA TCCTCGGACT TGGAGTGGAC GATATGGTAC
GTCTTTATAA AGGAACCAAG GAGCGTTTGA TTACAAATTC GGTCTCTGAT TCTCTATTTG
CTGTCTATTA GTATATTGTA CTTTTGTCGA TTAAAAAGCA AGGTGGATAC CGGGAACACC
ATTATCTCAA GGCTATGAAA GAGGTCATTG TTCCAGTCAC GATGACATCG TTGGTCAATG
CATGCATGTT CGCTATGATG AATATAAGCG ATATTCCCGC TGTGTATCTT TCAGCCCAAT
GTGCACTTTA TTCTGTGATC CTGCTTTATC TTGCGATCAT CACGTGCTTC CCAGCATACT
GCTACCTTGA CATGAAACGT CAGGCTGCCG GACGTAAAGA CGTCTTTTTC TGCCTAAAGC
AAGAGAACGC CCCGAGTGAG GGGAAAGCTG AGGATTTCCG TAACACGTTT CTTTATGATA
AGTTTTACAA ACCGCTTGTT TTGGGCTCTG CTCGCACTCG CATGTTCACG CACACATTGA
TCATGCTCGG TACAGTGGCC CTTTTCGGTG TCGGTATTTA TGGTATTACA GAGAGAGAGG
TTGGACTTGG TCTGGAAGAT TTCTTCCCGA GCGTAAGTGT TTATATGCCT TTTTGAGGGA
AAGATTTGGC GAAATCTCAA TTGGTTACGT CCTTCTAATT TCATAGTCGA ACCAGGCGAA
CACGTGGGCG ACGACTCGGA CGGAAGCTCT TGCGTCCTGG TCTATGGGAA TGAATTGGGG
AAATATCGAG TACACAGATC CGGACACTCA AATGAAAATG ATTAAGCAAT TTGAAAGTGT
AGTTGAAACT CCTCACGTAG CTGAAGTCGA TACCAAGCAG CTTTGGATGG CCAATTTCCT
AATCTGGAAC AGTCGCATGT GTTTGGATAA TTTTGATAGG TCAGAATTTG CCGAGCTTGA
ATGCGGACGT GATCAGTTCC ATAATGAGAC GCAATCGTCC TGCGAGGCCA CTTGGGTGCC
AAACCAGTTT GGACTTCGCC AGAAGATTAT TGTCAACCCT ACCGATGAAA TGTGCTACCC
AAACGAAGGC GGAATTTGTC GCTCAGGATC TAGCATGCAT CCTGCCGATC TAGAGGACAT
GGGAATTCTC GACCCAGATT CCGTACGGGA CGAAGTGTAC TGTCCTGTTG TCAGTGATTG
GACCGATGAG AAATGGCAGT TCTGCTTAAC GCAATGGCGT GCCAAGACAG GATTCTCTGG
TGGTCGCTTT CTATTGGATG ATCCACAAGG TTCGGAGACC GATTGCACTG GGGTATACGA
AAAGGATGAA GCGCTGACAT GGCCGATTCC TTTCAGTTCT GGTCCAACGA TGTATTCGTT
TGACATGTTT TCTCACGAAG AAACGCTCGT GATGATGGAC GAGACTCGAA CTTTTTGCGA
TGACGATCCT GATTTGCAGT GCTGGTTGAC AGGCATTGCC TTCGACTACT GGACACAGGT
ACTTACAAAT CTTGACTGGC TTCTTTCACA CTGCACTGGC TGGTAAACTC AGATTTCTTC
TTTTTTTTGG TACGATGGAA TTTTCACTGT TTTGGTGGAA CTCGGAGGCT ACTCTACACT
GGTCGGTTTC TTCATCTCTT TTGTATTCCT TTTCACAAAG CTGAGCATCG AAGGTCTCTA
CTCACGCCGA AAAATTTTCT TTGGAAGTTT GATTGGTGCA GGCTTGATAG CGATGACGAT
TATCTTGACG TTGATATCTG TCGTCGGATT GAGCGTTCTG GCAGGTGTCA GTTTGACCGG
GTTTTCCAAC ATGTCATTTG TTTTGAGCGT CGGCTTCGCA GTCGAGTACT CTGTACATAT
CATCGCTCGT TGGCTTCGGG CCAACTCATC GTATAGTACG AGTCTCAGCC GCGTCCAGTT
CACGATGTCT TTCTTGATGT TGCCTACTTT TATGTCATTT GTCTCGTCAA CGATTGGCGT
CGTTTGTCTG GCTTTTACAG AGTTCAACTT CAACCAAACA TTCTTTTTCA AGCCTTTGAT
CATTGTCATG TTCACATCGT ATTTCTTTGG ATGTTGGTGG CTTCCCGCGT TTTTGACGTA
CCTGGACTTT GATATTGTCA AGATGGGTAA GAGTGCTGGA ATCGAATCAG AGTACTTATC
GACTTCGACT TCGCCAGCCT TGCGTGCTGC TGGCAAAGAG CTTGATGATG ATGACGAAGG
GGAATCTACT CCGGTTGATG AGGAGCCGCG GAAAGAGCAC GAAGCATCCT CGGAGGAAGA
TCCCTGAGAA TCCAACCGAG GAGCCTAACT TGAAAAACGT GGCAGCCTCG AAGGAAGTCA
AACTTCTTAG GTCTCAGAGT GACGTTCCAT ATTGTGTCGT AATGACTAGT AAGACCAAGT
TTATTGTTTT GGTATGTTT
|
|---|
| Protein sequence | MNEKDLTAEN RGPPKKHVWL FHSMAATPWP YMVFLPTVFI FLIAFGWTRE DIIEDEVASI
WIPTKGSYAK DLDYGAQLGR DDLAISSFAA MAIARDGKNL FTESRLEEIR ARMEAAEGTT
VTHNGVTYTW QDMCALNSFP YEFPCARLSP MDLFQEARWF FDETSKITWY NEVLQNLLVK
PRIPRFGVMT ESCASPASDV CDFIVALRTN PTLVGQPAET ANPLLLFSDI GNMEMSDPCR
ICIEENYQSQ IEQLFSLAKP VFQVLSAELQ RALQVGFAND TEGSAQVGAM LSKTAQLAQS
ITIEDVKDFY QYFVTRGVYA SLGAPAYIAG YQQLLPLIEL CNPAFGLTCP STSVPNTTEA
EAALLAHADN SFSPVSTAGA PFPFWSESNG TGNLFAGSNP VSGSGVDMSG EMLSIVGYLD
LLNFGQDDWN PLYSNGYLDP VTPDPTWSAL VERNPLFNWF MASVTEADPG LVCGNDVLTG
TDTPSPEFNA ATAGAMAQAT SRWCTQYDLP TAEEPEGTFT KQHFARMWYD LLIASDSFLG
VTEGEDDPYT WTTGQGCGYN LGGERDPYTG RDEQSILFNA SRELYFIDEG ETIGVVSRNL
LFGDVTPRVG DYSFENPLQE VGLVQSLYAS LRPPGIVERV RNCNRPGGAV DISVEDAEDI
LKLYKEEMEN IWSRGWDDDN AGEVQFVGFF DDNGVIGTTG RMLQQITLDN TTLTTISILL
IALFSVLFLF SLDWVESRVL ITLVGVALVV LSFFAALGFA ILIGVKISVT IAWTLPFVIL
GLGVDDMYIV LLSIKKQGGY REHHYLKAMK EVIVPVTMTS LVNACMFAMM NISDIPAVYL
SAQCALYSVI LLYLAIITCF PAYCYLDMKR QAAGRKDVFF CLKQENAPSE GKAEDFRNTF
LYDKFYKPLV LGSARTRMFT HTLIMLGTVA LFGVGIYGIT EREVGLGLED FFPSSNQANT
WATTRTEALA SWSMGMNWGN IEYTDPDTQM KMIKQFESVV ETPHVAEVDT KQLWMANFLI
WNSRMCLDNF DRSEFAELEC GRDQFHNETQ SSCEATWVPN QFGLRQKIIV NPTDEMCYPN
EGGICRSGSS MHPADLEDMG ILDPDSVRDE VYCPVVSDWT DEKWQFCLTQ WRAKTGFSGG
RFLLDDPQGS ETDCTGVYEK DEALTWPIPF SSGPTMYSFD MFSHEETLVM MDETRTFCDD
DPDLQCWLTG IAFDYWTQIS SFFWYDGIFT VLVELGGYST LVGFFISFVF LFTKLSIEGL
YSRRKIFFGS LIGAGLIAMT IILTLISVVG LSVLAGVSLT GFSNMSFVLS VGFAVEYSVH
IIARWLRANS SYSTSLSRVQ FTMSFLMLPT FMSFVSSTIG VVCLAFTEFN FNQTFFFKPL
IIVMFTSYFF GCWWLPAFLT YLDFDIVKMG KSAGIESEYL STSTSPALRA AGKELDDDDE
GESTPVDEEP RKEHEASSEE DP
|
|---|
| |