Gene PHATRDRAFT_45757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45757 
Symbol 
ID7200782 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp157771 
End bp159563 
Gene Length1793 bp 
Protein Length530 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179986 
Protein GI219118427 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.846436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGATG ACCGGATAAG TGACCGTATA GCCTTCGGAT CGTGCAACGA ACAGGATCTG 
CAAAACAACC TCTGGCCAAT TATAGAATCG CGTCAACCCA CTGCGTTTGT TTGGGGTGGC
GATGCCATTT ATGCCGGTAC GTTTGCCGTT CTGTGCCGAC TCGGCGAGAA TCTCAGCAGA
TTCTACGTCT GGTATAGATA CCTGCTGGCT TCTTACATTT TTCTTTCTGT TTCATCACCG
TATTCCAGAC ACCTTGCTGG CACCAGACTG GTCTTCCTTT CCACCGAAAG CGCAACATCG
ATGCGCCACT CCTTCCCTGT TGCGGAAGCT TTACCAAACA CAACGAAATG TGCCTGCCTA
TCGGAGCCTA TTGCGCCAAA ATCTGACAGT GTTTGGAACT TTTGATGGTA CGTACGTAGG
CCTGACCGGC TTAAGTCCTT TTGTATTCGA AAGTGGTCGA TTTCTCATTT GGACACTGTA
TTCACCTTAC ACTAGACCAC GACTACGGCT GCAACAATGC CGATCGTACG TATCCATACC
GATACGAAAG TGGTATGGCC TACGTGGATT TTTTGGGCTT GGTTTCCTCC TCGCCCATGT
ATCAGCGTGC CCAAGCTGGA CATGGAGTAT ATGGAGTCAA GCTTTTTGAT TTTGCCCGGC
CGAAGGGAGA ACGCGAAGTA TCCGATGTCG AGGCCGGTCT CGACCCGGAT TTAAACAGTT
TTGGCCAAAA GGGCATGCGG ATACCAGCAA TGCACTCCTA TTCCAATCGT ACAGTCGCAG
TGTTTGTTCT CGATGTGCGC ACCAACAAGA CACCATGGAA AAAGGGTTCG GCTGCGTACC
AACCCGACCT AGAGGGAGAC TTTCTCGGAG AGCGCCAATG GCAATGGTTT GAAGCCGCCA
TTGCGCGCTC TACAGCCTCC GTCAACGTCG TTGTAAATGG GTTGCAGGTG CACGCAAATC
GCTATCCTGA TGGTAATATT GCGGAAGCGT GGGGCAAATA TCCCAAAGCA CAACAACGAT
TATTCGATGC AATTTTGCAA GACGGCGTGG AATCGCCTGT CCTCGTTTCG GGTGATGTGC
ACATGACACA ACTCATGCGA AAGGATTGCT ACAATCCTGA AACCGGCAAT CAGCGGTCTT
TGATCGAAAT GACGACCTCC GGAATGACGC ATTCTTGGGG AACTGTTAGT AGCCAGCCAC
TGGTGGATCC TACTCGCAAG CCTTCGTGGA GGGATTGGTT CGAGTCATAC GCAGCTACTC
GTATGGTCCA TATCCTCCAC ACTGTTTGCC CTTGGACCGA CTTGATGGTT TCCGAAAGTC
AAACTTCAAG CGGGGAGGAC AGCTCTCCCG AATCGGGGGG TGGTGAAGGA TCCAAGCAAG
GCTTGCAGTA TTCGTTGGCC AAGAATTTTG GCGAGCTCGA GTTTGACTGG GATGCCCGAA
TGGTCTCAAT TCGCAGTATA GGGGAAGACC CCGCTTCTCC TCCGCTTCTG ATGGCCCGAA
CGTCTATGGA TCGACTCTCC GGACGGGATG GCCTCATGCC CGGTGGTACC CTAACGGACT
CAGATTTTGC CGTAGCGCAC GAGGCTATAG TACCAGGTAC CGCCGAGTGG GTCTGTGTGA
ATCATAGAGG TGCCGAAAAC TACGTAACGC ACATGTTTGG CCATGTGGTT TCAGCTATGA
TTTTGTTGGC TGTGGTGCCT TTCCCCTTGC TCCTTCCGGC GTTGCTGGCC TGCTATCTTG
TACGCTGCCG TCGGAAAGCC AAAACGGTTC CGTCCACCAA ATTATTGATG TAA
 
Protein sequence
MNDDRISDRI AFGSCNEQDL QNNLWPIIES RQPTAFVWGG DAIYADTLLA PDWSSFPPKA 
QHRCATPSLL RKLYQTQRNV PAYRSLLRQN LTVFGTFDDH DYGCNNADRT YPYRYESGMA
YVDFLGLVSS SPMYQRAQAG HGVYGVKLFD FARPKGEREV SDVEAGLDPD LNSFGQKGMR
IPAMHSYSNR TVAVFVLDVR TNKTPWKKGS AAYQPDLEGD FLGERQWQWF EAAIARSTAS
VNVVVNGLQV HANRYPDGNI AEAWGKYPKA QQRLFDAILQ DGVESPVLVS GDVHMTQLMR
KDCYNPETGN QRSLIEMTTS GMTHSWGTVS SQPLVDPTRK PSWRDWFESY AATRMVHILH
TVCPWTDLMV SESQTSSGED SSPESGGGEG SKQGLQYSLA KNFGELEFDW DARMVSIRSI
GEDPASPPLL MARTSMDRLS GRDGLMPGGT LTDSDFAVAH EAIVPGTAEW VCVNHRGAEN
YVTHMFGHVV SAMILLAVVP FPLLLPALLA CYLVRCRRKA KTVPSTKLLM