Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45728 |
Symbol | |
ID | 7200759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | + |
Start bp | 48068 |
End bp | 49121 |
Gene Length | 1054 bp |
Protein Length | 331 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179963 |
Protein GI | 219118377 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.728584 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GAGGAGTCTT GAAACCCCCG CACGACCAGA GAAGTACTCA ACCAAATAGG CTATCACCAT GACAACGCGT TGGCATTCTT CTCTTCGGTC ACTGATTCGG CCTCGTCGCG TCGGAATCCT TCATCGACGG CTGTTCCACG CGACGAGTTC CCCACAAAGT GTGTTGCATA CCGAATGGAT CGGACGCCCC AGTCTGGACA GCCAGCCGTT GACTGGTACC GTGCTCGTCT TTTTGCACGG CTTATTGGGG AACAGTCGTA ACGTCAAGAC GTTGGCGCAA AAAACATGCG CGTTGTACAC CTCACCGGGC CTTTTGGTGG ACCTCCGCGG ACACGGACGA TCGAAGGAAT GCCACGAGTA TGGGAGTGGC ACAGAGACGG ATCGAGTTCC CGTAACCTTG GATGACTGCG TCGGAGATAT CCAAGAAACA CTCCAACACG TTGGTGTGTC ACAATCTACC AATGGCAAAT TGACGAGCAC CACCAACATT ACCTTCGTGG GACATTCCCT CGGCGGCCGT GTCGCCATGC AGTACGTGCA CGCACGGTTG GAACCCCGGC CATCGCACGT GTGGCTGCTC GATACCGTTC CGGGCCTCAC CAACACCAAG GTAGAATCCG TTCTCCGGAT AGCGCAATTG GTCCGGGAGG AGAAATCGGC GTGGACTCGA CCCAACCTCC AGCGTGCACT GACCGAATCG CACGGTTTGG ATACCGCGAC GGCTCAGTGG CTGGCGAGTT CTTACGATCC CTCGACGCAC GACTTTGGCT TTGACCTCAC TGTGGCGCAC AATCTCGTAC AGAGTATGGA TGAACAGGAC TTTTTGGGGT TTCTCCAGGA GGCCGTCCAC GAACACTGGT GTAAAATTGA TCTAGTCCGG GGTGGCCAAA ACGCGGACTG GCACGCCTAT CCCCACACAA TTTCCTTGCT ACAGGCGATG GCGAAAGAGC ACGCCGGAAC GTTTGGTTAC CACACTCTAC CCAAAGCCGG ACATTGGGTC CATATTGATG ATTTGCCCGG TCTTTTGAAC GCCATGCGAT CCCGCCTTTT GTGA
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Protein sequence | MTTRWHSSLR SLIRPRRVGI LHRRLFHATS SPQSVLHTEW IGRPSLDSQP LTGTVLVFLH GLLGNSRNVK TLAQKTCALY TSPGLLVDLR GHGRSKECHE YGSGTETDRV PVTLDDCVGD IQETLQHVGV SQSTNGKLTS TTNITFVGHS LGGRVAMQYV HARLEPRPSH VWLLDTVPGL TNTKVESVLR IAQLVREEKS AWTRPNLQRA LTESHGLDTA TAQWLASSYD PSTHDFGFDL TVAHNLVQSM DEQDFLGFLQ EAVHEHWCKI DLVRGGQNAD WHAYPHTISL LQAMAKEHAG TFGYHTLPKA GHWVHIDDLP GLLNAMRSRL L
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