Gene PHATRDRAFT_45717 details

Gene Information

• Locus tag: PHATRDRAFT_45717
• ID: 7200752
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: -
• Start bp: 8376
• End bp: 10530
• Gene Length: 2155 bp
• Protein Length: 615 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002180156
• Protein GI: 219118779

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCCATCAACA GGTAAAAGAT CGCTTCACCA TTTGTAGGAG TCTTCAATCC GGCAAAGAAC 
TCTGTGGTAG AACATTGTTT CGTTTATTGG AAGAATGTGG AAGAAACTTT TTCAACAGTG 
GCTCTTAGTA GTGGCAATTA CGCGGAACAT GGCCTCTGCT TTTGCGTTCC AGCCGCAACA 
CCGACGGCGG AGTGAGAGCC ATCACCTTCG TACAGGCAGT GTCCAGCAGA AGCGGCCGTC 
GTCCTTTGTA GGGTCGCACG CCCCTTACAC TAGTTCAAGG ACAACGTTGA AAGGTATCGT 
AAATCCAGAT TCCTTCTTCA CCGATGACGA ATGGCATCCA CACGATCCTG CCTTTACCAC 
GCCCCAGCTA TTGGCCGGCG TCTGGGATCA AATTGCGCAT GCTGGAACCA TGTCGAAAGG 
AGTAAGTCTG CGTCGCGCTA TAGATTGGCA GAGAAATTGA TACGCAGGAA TTGAGGGTTG 
ACGGATTGGT CTCGTCTTTA CATGCTGCTC GTCAAAACTT TTGTTCTATC TGCACCGACA 
CAAAGATTCA TTCCGTCTCA TGTGTTTCCT GATCAATTCC TTTTTGTCCC CTGACTTAGG 
AAACAAATAC GGTGATTTAT CCGCAAATTC AAGATAAATT CACACCCCGC TATCTCAATC 
TACTCATGGG CCATCTGGAC TTTTGCAAAG ACGTTTGCGA CCACTTTGGT ATCTCAACGG 
CACTGGTGCC GTACCAGAAA GACGGCAAGA TTGTCGGATT TACTGTGAAA AGCTTCAGGA 
ACAGCGAAAG TAAAGAAGAC GAGTACGAGT TTGGCTACGA TCCCTTTTGG GATGATGGGA 
CGGATTTTGA TAACCTCTAC GCGGGTGTAG ATGACGACGA TATGGCCAAG GATCCTTATC 
CGGCGATTGA AGTAGTCGTT CCGGACGATG ACGAAGACAT TATTGACATT ACTAAAGCAT 
GGGTCGGTAA GATGATGACA GATATGGGAC TTTGTCCGTT TACTGCTGGT CCTGAACAAG 
CCGGTTTGCC GATGGGCAAC GTGCACTACG AAGTCGATCG TAGCACGGGA GTCGAAGAGA 
TGTACGCCAA ATACTGGCAC GAGGTGGTTC GGGTCGAGCA AAACAAGGAA AAAGACATTT 
CCACCACGCT ACTGATCGTC CCTGAGTTCA TGAGAGACAA CGTAGAGCTT TTTGAGTCGT 
TTTCGAATAC TTTGACGCAA CCCTTGACGG CCTTAGACGT CGAAGATTTG CTGCAACTGG 
TCTTTTTCCA TCCTCAGTGG GTGTTTAGGG ATGGCAATGC TCGTGCTGGT GAAGCCCAGG 
CTGGCAACTA TGCTCGAAGA TCACCTTGGC CCATGATCAA TATATTACGG ACCAGCCAAG 
TACGGGCCGC CCAAAAGGGC ATTCCGACTG GTCTCGTCTA CAAACAAAAT GAAAAGACAT 
TGTCGTCTCT TGGCGTCGGC CAGTTGGAAA CTATGCTACG ACTACGAGAT TGGAGTGGGA 
TTGCTGATTT CAAGGTCAAT CGCCGGGAAT ATGATGCACT CAAAATTGCA CAGGACTATC 
AAAGAACAGG AAAGCTTTCT GAGGAAGACA TGTCGCTGGC AAGCGATTCT ACCCCCGCCG 
CCAATAAGAT CGACCGATCT CAGGTGGAGC AAGGTAATCT TGTCAATGTC TTGTTGCAAG 
CCTTGGAAAA ACGATTGGGA AAGAGCGAAG GTGGCGTAAT TTCAACCTTG AGCGGACCCG 
AGACCAGTGC CACGGCAATG GCTGGTGATG TCTTAATTGA AGAATTGGAT AGGATTGCTT 
CGAGAGGCAC CACTCCTATC GCAAACGTTG AAGAAATAGT ACCATCCAAA ACAGAACCAA 
TTCAGCTGGA AGAGGACCAA GTAGTGAGAC AGGACACAGA AAAGGAAGGC GTCCCGAAAG 
AATTAGAATT GGCACGGAAA AAACGAACCG AAGCGGCTCG AAGAGCTATG CTGGACGATA 
TTGATGAAGA ACCGTCTGCT TCCGGACGAG AAGCTATTGG TGGAGACCCA TTGACCGATG 
CCTTGTTTGG AAGAGGCGGC ATCCCCGATG TTGCGGACGA TGATGAGTTA AAAGGTGTGG 
ACCCTAGCTC TTTATTCTAA TTAATGCATC CACCACGCAG TATGCCTTTT CGAGA 

 

Protein sequence

MWKKLFQQWL LVVAITRNMA SAFAFQPQHR RRSESHHLRT GSVQQKRPSS FVGSHAPYTS 
SRTTLKGIVN PDSFFTDDEW HPHDPAFTTP QLLAGVWDQI AHAGTMSKGE TNTVIYPQIQ 
DKFTPRYLNL LMGHLDFCKD VCDHFGISTA LVPYQKDGKI VGFTVKSFRN SESKEDEYEF 
GYDPFWDDGT DFDNLYAGVD DDDMAKDPYP AIEVVVPDDD EDIIDITKAW VGKMMTDMGL 
CPFTAGPEQA GLPMGNVHYE VDRSTGVEEM YAKYWHEVVR VEQNKEKDIS TTLLIVPEFM 
RDNVELFESF SNTLTQPLTA LDVEDLLQLV FFHPQWVFRD GNARAGEAQA GNYARRSPWP 
MINILRTSQV RAAQKGIPTG LVYKQNEKTL SSLGVGQLET MLRLRDWSGI ADFKVNRREY 
DALKIAQDYQ RTGKLSEEDM SLASDSTPAA NKIDRSQVEQ GNLVNVLLQA LEKRLGKSEG 
GVISTLSGPE TSATAMAGDV LIEELDRIAS RGTTPIANVE EIVPSKTEPI QLEEDQVVRQ 
DTEKEGVPKE LELARKKRTE AARRAMLDDI DEEPSASGRE AIGGDPLTDA LFGRGGIPDV 
ADDDELKGVD PSSLF