Gene PHATRDRAFT_45701 details

Gene Information

• Locus tag: PHATRDRAFT_45701
• ID: 7200514
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 976367
• End bp: 978603
• Gene Length: 2237 bp
• Protein Length: 444 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002179756
• Protein GI: 219117942

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.597796
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCGCAAACTG CAAACCTGTG TGCCGACACA GAGAAATTAA TGTAAGTTCT TTCGAAACCA 
TTACCATGAG TTATTTTATT CGTTCCAGAT ATTGCGGAAC TACCGGTCAG TCTTGTTCAA 
CCTTGCTGTT CTATCTGAGT TCATAGTTCG TGCGAAGGCT GCGTTTTGGG CGAATAATTG 
AAAGTTCTGT TCATCATTGC TGTTGTTTAA CCGGGCAACA TCCCCCCACC ACAAATTTTC 
GGTTTCTCCT CGATCGTTAG TCAGAAATCA ATCCCAATCA TTCGACTATG TAACCCCAAG 
CATTCCATTT GATTATCCGG TGCTATTATC TTTCTGGAAG AAGTGGTCCC GTTGATTTTG 
TATGCATTGG TTTGGCATCA ATCACGAGGT CCCCATTTTT TCAGATACCT CGAATTGTCC 
GAATTTCCCT CGACTTTTCT TGAGGATCTC TCCTTCCCAA CCGCTTGAAG TAGCATATTC 
CAGGATTTCG CCGCAGTTAC TTTCTTATCG TAGCGTTAGA GACGACTTCA TTTGATTTGT 
CGTCCCCAAA GATGTAGGAG ATGAATTTGG TGGTGATTTT CATTTCTTCC ATTGTCTCCT 
GTGCGTCGGA AGTAACTTGC GTTCGTCATC CAATTCAGCT CTGTCGGCTT CTCACTCACA 
CAAATTCATT CTTCTCATTA TTACTCAGCT GTCTAATTTG AAAATGTACT TCTCCAAGCT 
CGCTGTTCTC TCCGCACTGA CTCTTGCCAT TGGCTCAGAA GCTCTGCTTA CCAACCCACT 
ACAGACTGGA AACAAGGCAA CCACAAATGG GTAAGTTTCT CGCCGCATCA AAATGTATTC 
ACCGAAACAC AAGACCATGC TTTGCTGACA AGAGCATCCT TCACTTTGTC AGATTGAAAG 
ATCGCGCCTA TGTCACCCGT GACATCAAGA CTCCTGACCC GATCCCTGTT TCTGGACAAG 
AAGAGGCGAT GGAACTCATG AAAACTGGAC GTCTCTACCG CTACAATATT GGCCCGAATG 
AGGAATCGGT CGTCTCCGTA TGCGAACAAG AAATTGCCGC CTATACCGGT CACAAATACT 
GTGTCGCCCT CAACTCGTGT GGATCCGCCT TGATGTTGCT GCTCAAGACA ACTGGTCTCC 
AAGCTGGTGA CAAGGTTCTT AGCAACGCCT TCACTTTTGG TGCCGTTCCT TCTGCCATCG 
AGCATGCTGG CGGAAAGGCA GTGTATGTCG AATCCACCAT GGACATGGTC ATAGACTTAG 
AAGATATGGA GAAGAAACTC ACAGATCACC CAGATTGCAA ACATGTTCTT ATTTCTCACA 
TGCGCGGAAA GCTCGCTGAT ATGGCTGGAA TCAAGGCCCT GTGCGATAAA TTTGACGCGA 
TTCTGTTGGA AGACTGTGCA CATTCCCTAG GTGTAGAATA CGCGGGGAAA CACTCAGGTC 
ACATGGGAAT TGCCTGCGCT ATTAGCAGTC AATCGTACAA GATGATCAAC TCGGGTGAAG 
GAGGCTTTTT GCTCACTGAC AATGAGGATA TTGCCGCCCA AACTGCTGTC TACGCCGGTG 
CCTACGAAGG TCTTTCTGCC AAACACGTTA CTGTACCGAG CAAAGAACAC TTTAAGGATT 
ACCCAACAAC TCTACCGAAC TATTCTCTTC GAATGAGCAA TTTGGCAGCG GCTGTCATTC 
GTCCTCAAAT CAAGACTCTC GACGAGCGAA TTGCCAAATA TAACAAACGG TACAACGATC 
TTGTCACCAA CCTCGAATCC CGTGTTGGCG GTCACATGAC ATTCCCACAG CTTACGCCTG 
AAGTAACAAT GATGGTTCAT GATTCACTTC AATTTAACCT TGACAAGAAA TTCTCTCCCG 
AAATCATCGA AGCGTTCATC GAAGAATGCA AGGAACACGG ACTTCCAGTC GAATTATTTG 
GACATAAGAC CAATGCACGG AATTTTGTGA ATTGGGGATT TGCACCAGCC GAGGATCCTC 
TGCCGAAGAC TGCGGATATG CTCTCCCGTG CCTGTGATGT CCGAATGCCA CTTATGTGGG 
ACGACGAAGA TTTTGAAGAC ATGGCGAACG TCCTAGTGGA AAGCGTAGAA AAAGTCCTTG 
CGGACGCCGG AGTTGAGTAG CCGTTTTGTT CAGTTTTGTG ATACGGTTCG TGTATGAAAA 
TATTGGAAGC ACGAGGCTAC TGATGTACAG TTAGGCATTA GACCGTAACA TTCAGTAAGC 
ACACATATAC AGCATCG 

 

Protein sequence

MYFSKLAVLS ALTLAIGSEA LLTNPLQTGN KATTNGLKDR AYVTRDIKTP DPIPVSGQEE 
AMELMKTGRL YRYNIGPNEE SVVSVCEQEI AAYTGHKYCV ALNSCGSALM LLLKTTGLQA 
GDKVLSNAFT FGAVPSAIEH AGGKAVYVES TMDMVIDLED MEKKLTDHPD CKHVLISHMR 
GKLADMAGIK ALCDKFDAIL LEDCAHSLGV EYAGKHSGHM GIACAISSQS YKMINSGEGG 
FLLTDNEDIA AQTAVYAGAY EGLSAKHVTV PSKEHFKDYP TTLPNYSLRM SNLAAAVIRP 
QIKTLDERIA KYNKRYNDLV TNLESRVGGH MTFPQLTPEV TMMVHDSLQF NLDKKFSPEI 
IEAFIEECKE HGLPVELFGH KTNARNFVNW GFAPAEDPLP KTADMLSRAC DVRMPLMWDD 
EDFEDMANVL VESVEKVLAD AGVE