Gene PHATRDRAFT_45664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45664 
Symbol 
ID7200417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp857586 
End bp858525 
Gene Length940 bp 
Protein Length287 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179731 
Protein GI219117890 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCTT CTTTCCAAGA CCCAACCTTC CAAGACAGCA AATTCGCAGG GCCGTGCAAG 
AATGCATGTA GTGACTTGTT GAGCAGTGGT ACACGCAAAC GCTCTTCCAG AGGTCGTAGA
AAGCGGAAAG AAACGGTGTC TCCTGGACTT CGTAAACCTA AACGCTGCTT GACCGCATAT
AACATATTCT ACCAGCACGA GCGGGAGGCG ACGTTGCTCG AGCTGCCCAT GAATCCTTCA
GGAAAACCCA GAAGCGCGAG CGGTAAAATT GCATTTATTG ATTTGGTCCG GAATATAGCG
CTCAAATGGA AAGCTCTTGA CACGAAGAGT CGAAAGTACT TTGAAGAGCT GGCGGTGAAA
GACAGAGAAA GATACGCAAT AGATATGGCG CAATGGAGAA GCCGCAAGCG TCGCACAGAA
ATCGAAGCTG AGCAACAGGA GAAATCGACC TCACAGTCAG ACGTCAACAA GAGCTCAAAT
CCAGTTCCTA TGCCTGTGTC AAGAAGCATG GTAGTAACAG GGTCAGACGA ATTTTTACCA
TTTCAATGTT CCAGCAGAAA TTCTGGTTTT ATGAAAATGA AGGAATTTTG GTCGCTTCAG
GAACTCAAGC CTTCGTTAAA AAACCAAGGC CATCTTGGTA GCATGGATAA GCTGCAGCAA
AGGAACGAGC CACAAGTATG GGGAGGTATC TCAAGCTTCT ATCACGTAAC AGACATGCGC
GGACCAAAAA TTTCTGACCT TATCAGCAAA CTAGATGCTG AAAGCATTTC TTTTCTGGTT
GAAACCTTTA CCATCGACAG AAAACTGACA GCAAAACCAA TCTGGGGTCC GCCAGCCGTT
ACTGTTGAGA CCTCCCGCAA ATAAGAGCAG TCGCAGAATT GATTGGGTTG TGGCGTATTT
GCAAGAAATC GTTGAATGTC ACTGTGAACG AATACGATAT
 
Protein sequence
MNSSFQDPTF QDSKFAGPCK NACSDLLSSG TRKRSSRGRR KRKETVSPGL RKPKRCLTAY 
NIFYQHEREA TLLELPMNPS GKPRSASGKI AFIDLVRNIA LKWKALDTKS RKYFEELAVK
DRERYAIDMA QWRSRKRRTE IEAEQQEKST SQSDVNKSSN PVPMPVSRSM VVTGSDEFLP
FQCSSRNSGF MKMKEFWSLQ ELKPSLKNQG HLGSMDKLQQ RNEPQVWGGI SSFYHVTDMR
GPKISDLISK LDAESISFLV ETFTIDRKLT AKPIWGPPAV TVETSRK