| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45650 |
|---|
| Symbol | |
|---|
| ID | 7200440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011675 |
|---|
| Strand | - |
|---|
| Start bp | 818119 |
|---|
| End bp | 819345 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179921 |
|---|
| Protein GI | 219118286 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00296757 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAAAC GGCGAAATGA GCAGGCGCAG ATGAGCAAAG AAGATTTCGA AGCACAAATG
GACCGCGAAG ACACCGACAG TGTCCCTGCC GTGTTCGAAC AGGCCTCGGC CGAACAACTC
GAGCAGCGTC GTATTGTTCG TCGATCGACA CGCCCCCCAT CCATGTCACC AGCCACGAAT
ACGCCGGTCT CATCGTCTGT GCCGCTGTCG TCCAATCCTT TCGCTGGCGT CAAGCTATCT
TCCGATTGCA AACCTCTTTT TTCGTTCGGA TCAAAGCCAA CCGACGGCAC CAGTGTCCAC
GACAACCAAG AGCAACCGAA GCCATACGCT ACACCTTCCC CCTTTTTATT TGGTACTTCT
GCTCCCGCGC CAAAAATCAG CACTATCAGT TTCGCCCCAC CTCCAAGTGG TGGCATGTTC
CAATTCTCTC CAGCAGCCAG TACAACATCG GCATCCGCCA TATCGACGAT TTCAACGACC
AATTGGGGGG AAAAGAGTGC CGAGCTGGAT AGGACCTTTC GTGAAACGGT GCTGTCGTCT
AGCTGGGACG GTCCCCAATA TCATAGCAAA ATAGACAAGG CCTATCTTAA GGACTGCTTC
GCCCAGGAAA CGGCGTACGT CAAGGAGAAA GAAGCGGCTA CAGCAACCAT TCGATACTCG
CCATCCAAAC CAGCCACTTC CGAGTCTACG GCATTTGGTA CGTTTGGAAA GTTTGCACAA
TCCACCAGTA GCAACTTTTC CAAAACACCG ACTCCAACTG CGTTTGCGCC AATCCCCGAC
TCGTCTACGA CAGACAACGA CAACAACGCT GGAGAAGCCG AGGACGAAGA CACAATGATC
CAACCAGCGT CAGATCCCGA CTGGGAGATG GACTCCGAAT TTGGCCGCGT TTTTTTCTAC
CACCTGGTGG ATACCAAAAA GCCGGAATCT GGATACGCGG GGTTTGGCTC CGGCACGTTG
CGTATCCAAA AGAACAGCAA GACCGGAAAA TATCGCATGC TGATGCGAAA TCCCGCCGGC
ATCAAGGTTT TGATCAATAT TCTGATCACC TCCGATATGA CGTTCAAGTT GACTGCGTCT
AAACGAAAGG GTCAAGACGC CACCGAAATT TCTTTTTTTG CCACGACTAG TGTGGATCGA
GGCTACGAAC AGTTCCGGGT AGTATCGCTT GCCGAGACGG GAAAGAAGTT GCACAAAAAG
CTCGAGTCGT TGGCCTCCGT AAGCTAA
|
|---|
| Protein sequence | MGKRRNEQAQ MSKEDFEAQM DREDTDSVPA VFEQASAEQL EQRRIVRRST RPPSMSPATN
TPVSSSVPLS SNPFAGVKLS SDCKPLFSFG SKPTDGTSVH DNQEQPKPYA TPSPFLFGTS
APAPKISTIS FAPPPSGGMF QFSPAASTTS ASAISTISTT NWGEKSAELD RTFRETVLSS
SWDGPQYHSK IDKAYLKDCF AQETAYVKEK EAATATIRYS PSKPATSEST AFGTFGKFAQ
STSSNFSKTP TPTAFAPIPD SSTTDNDNNA GEAEDEDTMI QPASDPDWEM DSEFGRVFFY
HLVDTKKPES GYAGFGSGTL RIQKNSKTGK YRMLMRNPAG IKVLINILIT SDMTFKLTAS
KRKGQDATEI SFFATTSVDR GYEQFRVVSL AETGKKLHKK LESLASVS
|
|---|
| |