| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45551 |
|---|
| Symbol | |
|---|
| ID | 7200620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011675 |
|---|
| Strand | + |
|---|
| Start bp | 521402 |
|---|
| End bp | 523159 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179665 |
|---|
| Protein GI | 219117752 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CACAAATCCA TGCAAGAAGT TCTGCGAACA CTGGTACGCT TATTGCCATG CGCAAAGGAT
CACCCTTCAT TTCCGTAAAT GTTCGCCGCC ATGAACGGGA GGAGATTGAG CAACGGGACC
GATTCCACTC GAAGGCTGCT TCATCGTGAA GATTGTGGCG GTTCTAGTGG AGTCCGATCA
TCGCGACCAG TACCGAATTC ATCGAGACCG CAGACACAAA GAGTCCGCTT TCCGGATGAA
GATCGGGAAA GTGTCGATGG AACTCTGGAT AGCTTATTTG GTTTGATCAC CGCCGCCTTG
GCAACTGCTT GTTCAGCAGG TCTCTTTACT ATGTTACCAT TTTCCTTGGC TGCGTATCGG
AGATTGGCTT CACAATTGGG AGCGTCATCG ATCCTCGATG CATTGGCGCT GTTGCTCCCG
AATACGAGAA TCTGTTTATC TGGGGATTCT GATATACCGA GTCCAGTAGG AACTTCGATT
CTGGTGTCTA ACCATTTGAT GGATGGGGAC TGGTGGGCGC TATTAATGCT GGGGCGGTGC
GTTGGGCTTC GAGGGAGTAT TAAGTTCTTC CTTCGAAACG AGTATTTTAA TCTCAAACTT
CACAACTCAG ATTCCGCGAC AAGTCGATCT AACTCAACCA CAATTGCTAC GAGTAAAGCG
GTGGGAACTG CTGTTCACAT TCGGAACGAG AACGCCCAGG CCAGTTCATC GTTGCCGCGA
GTCTCGCACC TGCGCGAGGG CTCTACCTCT CACGGCATTG CCATCATGGC AAATCTTCTC
CACCAGTTTC TTGAGTTCCC GCTGCTGAGT GGGGACGACC ACACTGCTGA CAGAGAACAG
CTAGTTCGAC TGCTGAGGTC GTTTGCACAC GACAATGCAT CGGCCCCTGT TCATTTGCTG
TTCTTTCCAG AAGGATGGTC GCTCCACAAT GGTGCTGACC GAACAGCAAT ATTGGCCAAG
AGTAACGAAT TTGCTCAACG AGAAGGCCGC CCGCAATTAA AGCACCTGTT GCTGCCCCGT
GCTCGTGGTT TCAACGCAAG TCTTGAATGT TTACGAGAAT CCAGTCCAGT AGTCTACGAT
GTCACGATGG TACGTCATGC TGTTGTGGAG GACGTCCTGT CGTTTCTTTA CATTTTTCTA
ACACAGAAGC CTCTCCTCCA GGCCTACAGT GGGTACAATG GATCGCTTCC ACCTTCTATT
GAGCTTACCT TTCCCGCCTT GTGGAAACTG CTTCGTGGGT TCCCTCGTGA AATACACATC
CGAATCAAGC GATACAGCAT GGAAGAGGTT ACTCAGGACT CATCTTGGCT AGATCAAAAG
TGGGCAGAAA AGGATCGTCT TTTGAGTCAC TTTGCTCGGC ATCAAACCTT TCCTGCTGAT
AACCGAGGCT ACTGCCGACA TCGAGTCTTT GATACGAGAA CGCATGCGTT TGAATCTTCC
ATCATCGCAC TTGGACGCTT GCTGCTATTG CCATTGGCTG TTCCGTTGTT CGTTTTGGTA
TCTATCCCAA TATTTTGGGC CTTGATGTGG TTGTGGCTGG CACACTGGGC TTATCGGCAA
CTATTTGGTC GGGTAGAACA GTCGTCGTCC AACGGAGGCT CGTCTGGGAG TGTCGGAAGT
GCTGGTGCAG GTACCACACC TGGTACTTCG TCCGCTTCCG GAACACCCTT CTTCCCAGCT
ACTCCGTTTG CGTCTCCAAC GGTGACTTCC TGGCGTGACA TGTTCTCAAA GAGTGCCTCA
TCATCGTCGC CATCTTAA
|
|---|
| Protein sequence | MFAAMNGRRL SNGTDSTRRL LHREDCGGSS GVRSSRPVPN SSRPQTQRVR FPDEDRESVD
GTLDSLFGLI TAALATACSA GLFTMLPFSL AAYRRLASQL GASSILDALA LLLPNTRICL
SGDSDIPSPV GTSILVSNHL MDGDWWALLM LGRCVGLRGS IKFFLRNEYF NLKLHNSDSA
TSRSNSTTIA TSKAVGTAVH IRNENAQASS SLPRVSHLRE GSTSHGIAIM ANLLHQFLEF
PLLSGDDHTA DREQLVRLLR SFAHDNASAP VHLLFFPEGW SLHNGADRTA ILAKSNEFAQ
REGRPQLKHL LLPRARGFNA SLECLRESSP VVYDVTMAYS GYNGSLPPSI ELTFPALWKL
LRGFPREIHI RIKRYSMEEV TQDSSWLDQK WAEKDRLLSH FARHQTFPAD NRGYCRHRVF
DTRTHAFESS IIALGRLLLL PLAVPLFVLV SIPIFWALMW LWLAHWAYRQ LFGRVEQSSS
NGGSSGSVGS AGAGTTPGTS SASGTPFFPA TPFASPTVTS WRDMFSKSAS SSSPS
|
|---|
| |