Gene PHATRDRAFT_45431 details

Gene Information

• Locus tag: PHATRDRAFT_45431
• ID: 7200676
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 131608
• End bp: 135232
• Gene Length: 3625 bp
• Protein Length: 1158 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002179586
• Protein GI: 219117587

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.693925
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTTTC CAACCGCATC CCCCAGCTAT GATTCGGACG ATCCGCCATC TCATACACAG 
TTCTTGGATT TGACCAACGG CAAAGGGGGT GATCTGCTCC CGCATCCATA TCTTCCCCCT 
CAGCCGGAGT CCGATTACGC CCACGCAACA GAGACTCCTG TGGACGCGCA GGATTCCGAC 
GATCAAGACG ACAGCAACAT GGGCGACGAC GAAGACGACG GGGGTATGGA GGGATCCCCC 
ACAATCCGCG GTACGGTACC ACCCGGTAGC GGTGCAATCG GTATTAATCC AAACACTCCC 
GGTAAGGTCG TTGACGTTGG GCAGGAACAC ACGGGCCGCT GGACCAAGGC CGAACACGAA 
GCTTTCTTGT CGGCGCTGCA AACGTACGGT AAGGAATGGA AAAAGGTGGC TGCCAAGGTC 
AAAACTCGGA CGGTTGTCCA AACTCGTACG CATGCACAAA AGTACTTCCA GAAACTCCAA 
AAGACAATCG AAAGCACAGG GAAAGACGAC GTTACTCAGG TTCACATGGG CATTGATAGC 
GGTGTCCTTG ACAAACAAGG TAGCGGGAGT GCTGCCGGAA GTTCACACCA GAAGAAGCAA 
CGATGTCCCG CTCCGGTCTC TCTTCAAAAG CCTGAACGTC GGTCCAGTAG TGCCACTATT 
TCCGCCGCAC AGGTCATATC CAACCTTTCG TCCCATACGA GCACACAACC TTCTTCTATG 
GGCCCATCTG TGGCTGCAAG AGGTAGCGCT CCGCTAAAGT CCAAGTCAGC CGATCCGCAG 
TATAGTGCAA TGCGTCCACA TGGCTTTTCA ACGGAGGTTT CTTCATCGTC TTTCCCATCC 
TCTTTTTCTT CCTGGATGGG AAACAATTCC ATGAAAATTA CAGCTCCAAA TCCGGAAGAC 
ACCAAAAACA GCTTTCCGGA ACCGTCTCCT GCAGCTACTG GCAAACGAAA ACTAGCGGAA 
ATTGCCGCTG CTAGAATGTT GGCCGGTGTA GGGCAACAGC AACAAAGGCA GCTTCAACCT 
CTGGTGGATC GCAACGATGA AGCTCCGACA CCGCCTCTAC CCGACACAGA AAATAGTAAA 
GGTTCAAGTC TAAATCTCCA TGAAGCCCCA CCGCCACCAT TACTATTTGG GGATGGGTTC 
AATATGTCAA GTTTGACGTC GAAAAAGGGA GTGGCTCTAC AAATTGTGAA TCCAGAAAGC 
TTGGGCGTTT CGCACGATAA ACCTCGTCGT GGAGGTGGAG ATTCGCCTGT CACACCCTGG 
GATGGGCAGC TCGAAGCCTT AGTCTACGAA AAGGCCAAAG TTGAATCTAA GGAGGAAGAG 
ACAGGAGGAT CAAAACCTGC TGCATTGCAT CCGGTATGTG GCCCGAGTAC AGCATATGGT 
CGAACGCCAC TACATCAAGC TGTCTGCGAA ATGGATTTGG ATGGCGTAAG GTGCCAATTG 
CAGGATATGC CCAGCCAAAA TGTCAGTGTG CTGCATGGCC TCGATGAAGC AGGCTATTCT 
CCGTTGCACA GTGCCTGTGC TTTACGATTG AGCTACGGCC AAAGCGCTAT CGTGGCTCCC 
CAACTTGTCA GACTCCTCTT GTCTGCCGGT ATCTGCGATC CCTCTCGACC CGACATAAAG 
GGAAATACAC CACTACACTG GGCCGCACGT TCCGGGGATC GAGATGTTGT GGAAATTTTG 
CTTCTGAAAA ATTCTCTACT GGATGCCAGA AACCAGGCGG GCGAGGCTCC CCTTCACTGG 
GCGATGCGGG CAGGTGAACG AGGGACTACG GTCGCTTTAT TACTTTTGGA AAACGGTGCT 
CGACCTAGCT CACTGAGCAA AGAGTACCGT CGACCCTTGG ATGTAGCAGC GGATGGATTC 
TTAGACGAAG AAAGGTCGTT GGCTGTTCTG CGGGTCGCGG AACAATCATA TCGAGGGATA 
AAGCCAAGCA AAGCATTGAA AAAACGGCTA AAAGAAACCG CAAGCGAACG GAGAGATGCG 
CGAGCTGCTT TGCTAATTCG GTCCGCACAG TCTAGAACGC TCGTATTGCA TCACCCCGAA 
TGTTTGGAAC ATCACCCGAA ATCAGCTACG GATTGGGAAG CGCCAGATCG AATAAGGAGT 
ATTATGCGCC GAGTACTGCC TGCAAGTGAC CCTACCGGTG CGACCGAGAC ATCGGGCATT 
TTCCCTCACG AGGTAACGGT GTCCAAAGAA TTTGAAAGGG CAAAGCTTGA TCTCCTCAGT 
CGAGTGCATA GTACAGATTA TCTATCATTT GTCAATGCAT TGAGCAAAGA CCTCGAAAAG 
CAATTGCGAG AATCAGGGGG GAGCTTCAGC GCAATGGACG AGTCTGACAA TGGTTTTGGA 
TCACCACCGC CGGTAGTTCC GTTCACACCG CTCGTTCAGA GATCGCTCAT TAAAGTAGAT 
GAGTCTAGAA TCAAGCTGGG TGTAAACTCC GATACATCGT TCAGTGCAGG GTCACTCCGT 
GCTGCACGGC GCGCAGCTGG GGCAGTGCAG CATGCAGTGG ATTGGTAAGT CATGACTCCT 
GAATTTTCAA AGCGTGCTTG CAAATCACTT TCTAATTTTA AATCTTCCTT GTCTAGCGTT 
TTGGTTGGGA GAAATCGCAA TGCTTTTTGT GTAGTTCGGC CACCCGGTCA TCATGCCGGC 
ATAAATGGTT TGCTGGATGG GGGTGAATCT TGTGGATTCT GTATTTTCAA CAACGTTGCC 
GCAGGCGCTC TTTATGCGAT TTCAGAAGAT AGGCTCCTGT GTGGCCGGTG CGCAATTGTT 
GACATTGATG TCCACCATGG AAATGGAACT GAAGACATCG TTCGAAAATG CCACGACCCT 
AGCAAACTTT TGTTCTTCTC AATACATCTC TACGACAACG ATAGGAAAAA GAGGGGTTCA 
AATCAGTTTT CCTATAAGTT CTACCCTGGA ACCGGTTCTG AGGATGACCT TGCATTGAAT 
ATCATCAACG TGCCCATTGT ACCTTTGTGG AAAGAACACT CCGCTACTGT GCAACCTTCG 
ATAAAGACCC ACAACACAAG ACGGAAAACT CGAACATCTC AGGAAGGTCC AGACGAAGAA 
AGTGATACCA CGCCAAAAGA TAGTTCACGT ACAAGCGATG TTGGCAGCGA AGAAGGCTCT 
ACCGCTGCGT CTAATTCATC TCCCAGACCT GGAGGACTGT CATCCGGAAG AACTGCGTAT 
CGAAATGCAA TCCAAAATCG CTTACTACCT GCGCTTCGGG CTTTCAACCC TGATCTCATC 
CTCATAAGCG CCGGTTTTGA TGCAGCAAAA GGAGATGTGG GAAATGCTCG ACACGAGCGA 
GGCGGAGAGA AAGTTGGGCT CGACTTAGAA CCCGAAGACT ATGCATGGAC AACAAGAAAG 
ATTCTGGAGA TTGCCGATAT TTGTTGCCAG GGCCGCGTTG TTTCGGTACT TGAAGGGGGA 
TATGGAAGAA CGCCAGCTGC CTTGCCCACA GGCTCGTCCG CCCTGGATCG CACCTTGTTT 
GCCGAGTGCG CCATCCGGCA TTTACACGCC ATGGTTGATC CGTACGACAC CGAGCAGCGA 
TTTAGCTGAA TTTTGCAGTT AGCTTGAGAT GGTCCGAAAT TTGATTTGAA AAATTATGAA 
TGTATAGCAA TAGTGGAATT AGAAA 

 

Protein sequence

MSFPTASPSY DSDDPPSHTQ FLDLTNGKGG DLLPHPYLPP QPESDYAHAT ETPVDAQDSD 
DQDDSNMGDD EDDGGMEGSP TIRGTVPPGS GAIGINPNTP GKVVDVGQEH TGRWTKAEHE 
AFLSALQTYG KEWKKVAAKV KTRTVVQTRT HAQKYFQKLQ KTIESTGKDD VTQVHMGIDS 
GVLDKQGSGS AAGSSHQKKQ RCPAPVSLQK PERRSSSATI SAAQVISNLS SHTSTQPSSM 
GPSVAARGSA PLKSKSADPQ YSAMRPHGFS TEVSSSSFPS SFSSWMGNNS MKITAPNPED 
TKNSFPEPSP AATGKRKLAE IAAARMLAGV GQQQQRQLQP LVDRNDEAPT PPLPDTENSK 
GSSLNLHEAP PPPLLFGDGF NMSSLTSKKG VALQIVNPES LGVSHDKPRR GGGDSPVTPW 
DGQLEALVYE KAKVESKEEE TGGSKPAALH PVCGPSTAYG RTPLHQAVCE MDLDGVRCQL 
QDMPSQNVSV LHGLDEAGYS PLHSACALRL SYGQSAIVAP QLVRLLLSAG ICDPSRPDIK 
GNTPLHWAAR SGDRDVVEIL LLKNSLLDAR NQAGEAPLHW AMRAGERGTT VALLLLENGA 
RPSSLSKEYR RPLDVAADGF LDEERSLAVL RVAEQSYRGI KPSKALKKRL KETASERRDA 
RAALLIRSAQ SRTLVLHHPE CLEHHPKSAT DWEAPDRIRS IMRRVLPASD PTGATETSGI 
FPHEVTVSKE FERAKLDLLS RVHSTDYLSF VNALSKDLEK QLRESGGSFS AMDESDNGFG 
SPPPVVPFTP LVQRSLIKVD ESRIKLGVNS DTSFSAGSLR AARRAAGAVQ HAVDCVLVGR 
NRNAFCVVRP PGHHAGINGL LDGGESCGFC IFNNVAAGAL YAISEDRLLC GRCAIVDIDV 
HHGNGTEDIV RKCHDPSKLL FFSIHLYDND RKKRGSNQFS YKFYPGTGSE DDLALNIINV 
PIVPLWKEHS ATVQPSIKTH NTRRKTRTSQ EGPDEESDTT PKDSSRTSDV GSEEGSTAAS 
NSSPRPGGLS SGRTAYRNAI QNRLLPALRA FNPDLILISA GFDAAKGDVG NARHERGGEK 
VGLDLEPEDY AWTTRKILEI ADICCQGRVV SVLEGGYGRT PAALPTGSSA LDRTLFAECA 
IRHLHAMVDP YDTEQRFS