Gene PHATRDRAFT_45416 details

Gene Information

• Locus tag: PHATRDRAFT_45416
• ID: 7200506
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: -
• Start bp: 93479
• End bp: 95529
• Gene Length: 2051 bp
• Protein Length: 632 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002179791
• Protein GI: 219118015

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.710238
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAACGAAGCA AAACAGCAAA GAGATAAATT GGCGATTATC TAAACACAAA CGTGACCTTT 
TCTTCTCCCG TTCCTAAATA AATGGAAAGT ATCAGAAGTA ATGGAGAGCC TTGCGCTTCG 
CCTAAAAGTA CGGGTCTGAT ACGACCTACC GAACAGCCGA GGGTGGTGAG TCCGGTAACG 
CTGACTCCGA CGCCATCGCT GCTTCTCCAC CAAACGTCGC TGCGTTGTGG CTCAATAGTA 
TCACCTTCAC CCTCCGATCA AGGCGCTAGG ATTGGATTGG CAAAGCCTAG TATTTTGGTG 
ACACCATATC GGCATCGACA AGTACAAAGA AAGCGGCAAA GCGAGCGTGA TTCGGAAGCC 
GGGGATCGTT TCATTCCTTC TCGCAGTCGC ATAAATACGG CACTCTGCCG GCGTGCTTTA 
TTTCAGCAGC AGCAACAACA GCATGCAGAA TTAGGAAGCA AAAGGCTTCG TGATGAAACC 
ATTGACACCG CCCTGGAGCA ACCTCCGAGT CAACCGATAC AACGGTTGTC AAATGCACTT 
TTCGGTCTGG ATGAGATGAA CAAGCAGAGC TGGATGGGTA TTGTCGGTTC CGCATCAACG 
ACAAGCAAAA AGCAAAAAAG AAACGGACTC CCGAAGAATC GTGATCCCGA TCATGTCATC 
AATGAGCTGG GACTTTGGAT GCATTCCACT GCGTTCGGCA GTGACACAAA ACAGGCTAGA 
CGAGTTTTGG ATTGCCAACC CGCTGACCTG TTTTATGTAC CGGGCCTATT GCGACCACAA 
GATGCTACCA CACCCAGCGA CTACCAGCAG CAAGAGCATT CTCCTCGTAC TTTACAGCCT 
GCCACGGGAA GCTTGACAAG TTGGAATGAT TTCCACAATG TTTTGGCAAT TGCAGGTGAT 
ACCGTCGTTC ATTTTTGGGA CGCTGAGACA CGAGAAGTGC AAACACCCCT GATTGTTTGT 
AGCCAGCGCA GCTGTCAACG CCCAGGATCC TCTAGTTCCG CCCAACACCG TAGCACGGAT 
ACGTATCCCG ACAGCGATGA TCACACCACT GGCGATTGCT ACGTTGCTAG TCTCCAGTGG 
TGTCAAAGCA GCTGTGATCT GCGTCGATTG GCCGTTGGGA CACGGGATGG ATTAGTACAA 
ATATGGGATA CAGAAAGGCA ATTTTGTCTG CAAATTCTCA AGGCCCATTC CGGTACTAGG 
ATCACGGCTT TAGCCTGGAA CAAATATTCC TGCTCCCTGA CAACTGGCGG TGCAGACGCC 
AACTTACACA CTTTTGATCT AAGGGAACGA TCGCGTGGAT CCGGCGAAGA CGGCGCCTTG 
AGCCAAGTTG CTCGATTCCT CAATATCGGT CGCGGCCACA AGGCCGCAAT TCTCAGCCTG 
ATGTGGAATA GCGATGGCAC CTCTCTCGCG TCAGCGTCCA GCTGTTATAG CGATACCGCC 
GTTCGAATAT GGGATGTTCG TTCCTACCAA CGACGTGGGC TTCAATCTTG CCGAACCACA 
TTGGAACAAC CGGTTCAAAC AACTGGATCT TCAGCAAGGG ATAGAATTAC TGCGCTGGCT 
TGGTGTCCGT TTGAGCGTCA AATTCTGGCT GTGGGCACTG CTCAAGGAAA AATGCAATTG 
TGGAATGCGA CTGGGGAGCG GATGCTTCAA TCCAAAGATC TTTCACACCA CCGGGGTGAA 
AAAGCTGAAT CAGTCTCTTC CATAGTGTGG AGTCGACAGC AGAAAGAACT TTACTGCACG 
CAAGGGAAGG CGATTGCTGT TCGTCAATAT CCTTGTCTAG AATGTGTTCA AAAGGTGACG 
TCGGATGTCA CTCATCTGAG CCTGCGAGGA AGTCGGGATG GTTCAACCGT TGCCTCAATA 
GGAGTCGACG AGACCTTGCA AGTTTGGAAA ATTAGGAGAA ACGTTGGGGA CTTCTCCGTC 
AGCGACGATC GGAGCGTGAC TCTATCTAGT CTGTCTCTGG GCATGCCCAC AATCCGCTAG 
TTTCTTCTGG AATAGGTTCA TGACCGTGAA CTTCCTTTTT ATATTAAATT GGCTATGGTG 
TTTTTCTGAA A 

 

Protein sequence

MESIRSNGEP CASPKSTGLI RPTEQPRVVS PVTLTPTPSL LLHQTSLRCG SIVSPSPSDQ 
GARIGLAKPS ILVTPYRHRQ VQRKRQSERD SEAGDRFIPS RSRINTALCR RALFQQQQQQ 
HAELGSKRLR DETIDTALEQ PPSQPIQRLS NALFGLDEMN KQSWMGIVGS ASTTSKKQKR 
NGLPKNRDPD HVINELGLWM HSTAFGSDTK QARRVLDCQP ADLFYVPGLL RPQDATTPSD 
YQQQEHSPRT LQPATGSLTS WNDFHNVLAI AGDTVVHFWD AETREVQTPL IVCSQRSCQR 
PGSSSSAQHR STDTYPDSDD HTTGDCYVAS LQWCQSSCDL RRLAVGTRDG LVQIWDTERQ 
FCLQILKAHS GTRITALAWN KYSCSLTTGG ADANLHTFDL RERSRGSGED GALSQVARFL 
NIGRGHKAAI LSLMWNSDGT SLASASSCYS DTAVRIWDVR SYQRRGLQSC RTTLEQPVQT 
TGSSARDRIT ALAWCPFERQ ILAVGTAQGK MQLWNATGER MLQSKDLSHH RGEKAESVSS 
IVWSRQQKEL YCTQGKAIAV RQYPCLECVQ KVTSDVTHLS LRGSRDGSTV ASIGVDETLQ 
VWKIRRNVGD FSVSDDRSVT LSSLSLGMPT IR