Gene PHATRDRAFT_45267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45267 
Symbol 
ID7200277 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp658230 
End bp659496 
Gene Length1267 bp 
Protein Length363 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179261 
Protein GI219116933 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.947306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAATCCTGCT TCACCATGAA CATGTCACTT ACTGTTCGTT CGTCTATTAC TCAACACCAC 
GCAATCGAAT CACTTTTCCT TTATCATGAA GAGGCCCTCA CTGCCGATGC TTTCGGTCCT
ATGCTTAGGC GCCACCTCCT TAGCCGTCGT CCCAAGCGCA GCTCAGGTAG GAGCTGATCC
GATTCCTCGA TGTGGGGATT GCTGGTGCAT TCCAGAAGGC GGGACGGAAG ACGGAACCTG
TCCTACTTTT GAAGGAATTT GGCAAAGCTT TCCGGCAGCC TGGATTGATT CCTTTACATC
TTTCGAACTC CTCGCCTCGT CTCCACCTTT GACGCTGGTC GCAGAAGGCA CCGATAGCGC
CGACTGTTAC CCTTTTGCCG ACTCCGTCGG AGCTCGTCCA CAAAATAACT ATCCCGAATC
GGAAGCACCC CAATGTAAGC TTTTGTCCTC TCTATCGGAA GACGCCACTA CCACTGCGGT
GTGCGGCTAC AAATACGCTG ACGAGGCTGC CTCCTGTCGC GGACGCACGT ACGAGATTGT
GTCCTACGAA TCCGCCGTCG CTGCCGAAAC AGATTTCGCG GTGGTCGTTC ATTCTGGCCA
GTGTGGAGTG TGTAGCAACG CAGTCGACTT GGCCGTTCGC ATGAACACCA TAGATAGTAT
TGCCGATATT ACGGCTGCCT GTGCAGCCAG CTAGTAAGTT CAACGCAAGG TCGACACACA
GGACTCAGAG TGTGCCTCCC CATGTTTTGC CTTTTCTCAC GTTCTCCTAC AAATTTACCA
TAGTTTTGTG AGTACAACAG CCGGTGCTCG CTTTGGGGAA TTGACTGATT GTATCCAAAA
CGCAGGTTTT ACAACACCCT GCGCTACACT GTGGGCTCAC TTTGCCGCTA CCAACGCCGC
TGTTTGCTCT CTCGCCTGCG TATCTGCGGA CAACGAACAG AACTTTAACG GCCCACCGCC
AATGTGCGAG TTAAGCGAAT GTCTTGCATG TAGCAACACT CTGTTCGAGG ATGATTTGAA
CCGGTTGGCT GGAGTATACA AGTCCCCTTG GAACGCTGGC TTTGCCGATG CTGTTGCCAC
ACCTTGCTCC GCCTTTACTC GCATAGCGGA CCTTGATCCC TGCCAGGGAC TGGCACCCAC
AATCAGTCCA GCTCCATCAG CTATGCCTCT GGTTCCCACG CCGACATCCG GCACCCGCGT
GATTTTGAAC GACTTTGCCT TGGTGCCCAT CTTCGCCTGG CTAACATGGC GACATTTGTA
TGTTTAG
 
Protein sequence
MKRPSLPMLS VLCLGATSLA VVPSAAQVGA DPIPRCGDCW CIPEGGTEDG TCPTFEGIWQ 
SFPAAWIDSF TSFELLASSP PLTLVAEGTD SADCYPFADS VGARPQNNYP ESEAPQCKLL
SSLSEDATTT AVCGYKYADE AASCRGRTYE IVSYESAVAA ETDFAVVVHS GQCGVCSNAV
DLAVRMNTID SIADITAACA ASYFVSTTAG ARFGELTDCI QNAGFTTPCA TLWAHFAATN
AAVCSLACVS ADNEQNFNGP PPMCELSECL ACSNTLFEDD LNRLAGVYKS PWNAGFADAV
ATPCSAFTRI ADLDPCQGLA PTISPAPSAM PLVPTPTSGT RVILNDFALV PIFAWLTWRH
LYV