Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45190 |
Symbol | |
ID | 7200227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | + |
Start bp | 445497 |
End bp | 446639 |
Gene Length | 1143 bp |
Protein Length | 364 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179214 |
Protein GI | 219116839 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACTC GGTATCGATC CCTCAATAAG CCGTTCCATT CTTTCCCTTC TGTAACTTTG CGCACGCTCT TGGTTTCGCT AGCGATAATT TTCTTCGTTA CTCTTCGGTC AACGACAGCT TTTGCACCCG CACCCTCTTT GCTTGTTGCC GGACAAACAA CGCCGTTATC CACGTCGCCA ATACGGTCTT GGAGAAGCCT CTACGCTCGT GTCAATGGAG ACTCGTCGCT TCAAGAGCCA CTCCCGTTCG TAATCGAAAG TATACCACTT GATCAAAACG AACGCGTCTA CACAGAAATT TCTGAAGTCT GTATTCAGGC CTTTTTCAAC GATGGTGAGC AGCACCGGAA GATTCCTCCC TGGAAGGCAT GGCAACTGGG ATACCTACGT CAGTTGCAAC AGTCTGATCT TAAAGTGCGG CGGAGAAAAT ACCCAGATAC CAATTTCATG CTCGTTGCCC GGCGTGTGTA CCCCATCTCG GAGATGCCTG GCGCCGTACG ACACACGCCA CTCATCCTCG ATGTATCGCA AGTTCTGAAT TTGCAACCGC AACCGGAGGA AGACTACGTG CGTGGAGAAA TACTAGGATT TGTTGAAGTC ACCAAAAAAC CTTACGGACT GGGGAGCGAA AAGGTTGGCT TTGACGACGA ATCGCGGATC AAATTGCGTA AAATGAGCTT TTACGAGTCG CGCCCCGTCC TGACGAACCT CAGTGTCCGG TACGAAGCCC GCCAATCTGG CGTCGGCTCG AAACTCGTGC AAGCTTGTGA AGACCGAGTT TTAAAAGACT GGGGCATGAA GGAAATGATA CTGGAAGTGG AGGACGACAA CGACAATGCT CGCAATTTTT ATCTAAAACG TGGCTACAAG GTATTGTTTG AAGACCCGGC ATCGAGGCGA TACGATACGA CCGGTGTGTG GCTCAAGCAG GTACGATGCA AACGTCAAAT TATGCGCAAA GCTTTGGGTG CCGTGGAACT GGTCGCACTG AATGCCTTCG AAGTAAAGAA CAGTGTAAAC AAACTGTTCG GTATCAAAAT CCTTCAGCGG CTACGAGACA ATGTTCTCGG AACAATCAAG GAACGTGTAC GCTAGTGTGA CTACAACATC GCTAATAAAA CAATCTGAAC CTTTTCATCT TTG
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Protein sequence | MITRYRSLNK PFHSFPSVTL RTLLVSLAII FFVTLRSTTA FAPAPSLLVA GQTTPLSTSP IRSWRSLYAR VNGDSSLQEP LPFVIESIPL DQNERVYTEI SEVCIQAFFN DGEQHRKIPP WKAWQLGYLR QLQQSDLKVR RRKYPDTNFM LVARRVYPIS EMPGAVRHTP LILDVSQVLN LQPQPEEDYV RGEILGFVEV TKKPYGLGSE KVGFDDESRI KLRKMSFYES RPVLTNLSVR YEARQSGVGS KLVQACEDRV LKDWGMKEMI LEVEDDNDNA RNFYLKRGYK VLFEDPASRR YDTTGVWLKQ VRCKRQIMRK ALGAVELVAL NAFEVKNSVN KLFGIKILQR LRDNVLGTIK ERVR
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