Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45164 |
Symbol | |
ID | 7200208 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | - |
Start bp | 372756 |
End bp | 375026 |
Gene Length | 2271 bp |
Protein Length | 657 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179413 |
Protein GI | 219117237 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000065848 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATCGCTGCAG TTTTCTGGAA GAACAAAGTC ACAGTCAGTC TTTCGATAGG GACGACGACC ACTCACATTG CCTACCTGCT TACCCACAAG ATACATTCAC CAGAGTAAAC GACATCGTTT ATTTTTATCA CCCTTTGCGA GAAGCGTCGT ATTCAGTCAC CACCATGAGC GGCAGCAATA GCGCTAGCAA AACGGTCCAA AGGGTGGTGG GTAGTTTTGG TCGCCTCTGG GGGCGTGGAC ACGAAAGTTT TCCACCGGAG CTGCGGCGAA TCCTGTCGGT CTCGGGGCAG GGCGCCACCA CCTTTTTGCA GGGCTTGGTC ACTTGCGACT TGCAGAGCCC GCCGGCACCA CCTCGACCGG AACCCATTGA TCACCCGCAG CCCGGTGTAC CCAAATCCAT GAAAATGGAC GCCACTGGTA CGACCGAACT CCCCGAAGTC GAGTTTACCG ATCGACTACG CGCCGCCTGT TTTCTCGATC ACAAGGGACG CATCGTCACC GATTCTCTCC TCTGGAAGAC GGATGAAAGT CAATACTTTA TTGACGTGCC GGGTGCGACG GCAGATTCCT TGCTGCAGCA CTTGCACGCG TTCAAGCTCC GGCGTTCCAA AGTGACGATT GCCGATCGAA CTTTGGACAT GTCCTCGCAC GTTATCTTTG GCACGCTCAA CGCGGGAGGA TCGCCTCCAG GATACCTGTC GGGGGTGGAT CCCCGTCATC CCAGTCTAGG GATGCGTGTT TTACAACTGC CTTCCGAATC ATCATCCAAC GGCGAGAACA CCAGTACCTT GAACGAACAA GACAGCGACA ACCTTTCCTT GTCCACGCGT CATGAAGCCT TTGCCAAACT CGTCTCTAAA GTCTTTCCCA CGTCGCCCGG TAATTACGAA CTCGTCCGTC GCTTGGCTGG AGTAGCGGAA GGATCCGAGC TGACGGGCAA GATCGCCCTC GAAACCAACC AGGAGCATTT GCAAGCGGTT AGTTTTCACA AGGGCTGTTA CCTGGGTCAG GAATTGACCG CCCGCGTCCA CCATACGGGA GCCGTCCGCA AACGTATCCT CCCCCTGTTG CTTCTGGACC CCTACACGGA AGTACCACAG GCCTGGGGTT TGGCCAGTAG CTTGCAGCAA GGCCGTGCGG GGAAAAAATT TTCCGCCGAA GAGCTCCGGT CCTTGCCGAC GAGACTGCCT CGCCTTTCGG TTCTCACGGC GGGGAATTTG GTTGCCATTA CTACCGGATC CATCGAGCCT CCCGGAAAGG CTGTTGACAA CGCTGCTCGG GACGAACTGG CTCAAATTAA ATCCCGTGCC GAAGCCTTAC TGGCGCGGTT GGAAACGGAT TGCACTCCCG GGGCGAAGAT TGTCGATACC AAGGACGGGA AGACGATTGG ACAGATCGTG GCACCTCCCG TTAAAGGGAC CAACGTGGTG TTGGCTATTA TGAGACTGGA GAGTGTCGGG CTGCTGCAGG GCGGGGTATG GTCCAAAACG AACAAGGTAC GCATCGGCAA TGGCCAAGAG TTACGTTATT TGCCGTATTT GCCCCTTTGG TGGCCCGATT TGGATCCGAA AACAGGCAAG GCGCGGGCCG AGGACGTAGA TGGTGTTGAC CCCGATGAAG TGCGGGATGA GGACCACTCG CCGCGACCCG TTCGAATGCC CAAGATCGAA ATTGAAGAAA TTCCGCTGAC AGAAGGGGAA AGACGAGAGC TGAAGTAGAC GTATACGCAA CCCGGGTACC CAACACTCAA AAGTACAACG CTTGCCTAAA CTGTTAAGTT TTGCATTTGT ACTGCCAATT GAACATCTTT ACTACGAACG CCAACTTGTT TTTCCCGTTA AGACTGGGAT TGCCCATTCC ACCACCGTTG CAAGCGCTAC GCTCGTTCCA AGCTGGATTC ATCACGCCCG ACTGCCACAA TGCCTTGCCC CTCAGAGAGC GACCTCGGTC AACTAGTCAC CGACCACTAC CAATGAAATC CATGTGAAAT TAGCGAGTCG TACTATTGGA GCGAAGCCTC GTTCGCTCAA GCATATGGCC TTAGCATCTT TGTCCAGACG TGAAAAAGCG AGGCGTTGTC GAGACCCTCT TGGTCCCGCC TACGGGAAAG ACGATGCGTT TGTTCTGGTC CCCACGGCCT TGCCAAATCC AGGCAACGAG CTGGGAGCGT TGAATTTTCC CTTCAGCCAG GACGAGGCGC AATCGGCCGA CTTCGATTCT CTTGCTCTTT TCCTATACAT GTCGGTGAAA GGTATCGATA ATTTCGATTA G
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Protein sequence | MSGSNSASKT VQRVVGSFGR LWGRGHESFP PELRRILSVS GQGATTFLQG LVTCDLQSPP APPRPEPIDH PQPGVPKSMK MDATGTTELP EVEFTDRLRA ACFLDHKGRI VTDSLLWKTD ESQYFIDVPG ATADSLLQHL HAFKLRRSKV TIADRTLDMS SHVIFGTLNA GGSPPGYLSG VDPRHPSLGM RVLQLPSESS SNGENTSTLN EQDSDNLSLS TRHEAFAKLV SKVFPTSPGN YELVRRLAGV AEGSELTGKI ALETNQEHLQ AVSFHKGCYL GQELTARVHH TGAVRKRILP LLLLDPYTEV PQAWGLASSL QQGRAGKKFS AEELRSLPTR LPRLSVLTAG NLVAITTGSI EPPGKAVDNA ARDELAQIKS RAEALLARLE TDCTPGAKIV DTKDGKTIGQ IVAPPVKGTN VVLAIMRLES VGLLQGGVWS KTNKVRIGNG QELRYLPYLP LWWPDLDPKT GKARAEDVDG VDPDEVRDED HSPRPVRMPK IEIEEIPLTE GERRELNFAF VLPIEHLYYE RQLVFPVKTG IAHSTTVASA TLVPSWIHHA RLPQCLAPQR ATSPRSLKHM ALASLSRREK ARRCRDPLGP AYGKDDAFVL VPTALPNPGN ELGALNFPFS QDEAQSADFD SLALFLYMSV KGIDNFD
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