| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45160 |
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| Symbol | |
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| ID | 7200340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011674 |
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| Strand | - |
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| Start bp | 355289 |
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| End bp | 359790 |
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| Gene Length | 4502 bp |
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| Protein Length | 1481 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179410 |
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| Protein GI | 219117231 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0416976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCTT CGGATGGGAG GATAACACAA TTACACATAT TTTCTTCTCC AGCCAAGAAA
GCAGCGGGGC AGACCCCATC GTCAACACAG ATTCATCGTG CGCTGGCAGA GCGACGCATC
GTAAGACGCC TTTATAGAAA AGATGGGGAT CTCCCGCGCA TCGTGTTTTC ATCCGTGGAC
TGGCATCGAG ATATCGGGTA TGCCCTGCAC TCGGGCAAAT GGGAGAATGT TCGTCACCAA
CTTTCGCTTG TGGCGTCATA TACGAGTACA GCAATAGACC CCGACAATGT AGACCGACGG
AACGGCAATA GAAAAAAGCC ATTTTGGCGT CGTCTATCTT TGGGTGTGAC CACTTCGCGC
ACTGATTCCG GACGAGATCC GTATGGGCTC CTGCAAATAG ACCGAATGGG TCAGACTCCG
CTACATCTGG CGTTGTCATC CAGAAATAGT CCGACTGATG TTTTGATGGC GCTTATAAAA
ATAGAGCGTA GAGCTGCATC TATTCGAAAC TATTCCGCGC GAGTCCCACT GTTCTACGCT
GTCGTTTATC GGCATCATAT CGAGACGGCA GCCGCCTTGG TGGACGCGTT CCCAGAGGCG
ATGTCATTGC GTGATTCGAA AGGTTTAACG CCTCTTTCCT ACGCCTTTGA GATTGCCGAA
CAGGAGTCCG TTCTCTGCGA CATACCGCGA ACCTACTGGA TGCCTGCATC GGGCCAAAGC
GAAGAAGCTG CTTGGCAGGA ACTACAAGGC GAAAGATGGA GCATGGTGCG GCTACTACTA
GCGTCGGCAA CGTATCCGCA AACAAACTTG TCGGTGGGCG GTAACACATC CATGTTGATT
GATGCCATGA TGCATTCGGC TCCGCCTATT GTGATTTCCT TATTAATCGG AGCATCCACA
TCGCTCTTGT CTCATGAAAA TAGAGCAACT GCGTTTGCTG CTTCGACCCT CTACACTGCA
ATCACTCGAC ATTATCCGCT GTCGATTCTT GTTAGTCTAG CATCAAAATG TCCCAAAGAT
GTTCGAAGTG CAAGAGACGA GACGGGAATG GGCCTACTGG CTGCTCATTT CATTTCTGCT
TGCTTCGAGA CAAAGCCCAA TACTTACGAA TGGGCGGTGT CACCAAGCTT CTTTTCTTCA
ATTAGAGAGT GCATTGTTGA CCAAGAGATG CATGAGGAAG GTTCTGCTTT TGTCGATTGG
TGGAGAAAGG TCGAGTTTTT GATTGCATTC TGTGCTGGTG AGGACCCATC TCGATTCCCT
AAAGACCTGC TTTTGCATGC AGCATTGACA AACTCCGACA CCCCACCCGC AATTATTCGT
GTTCTGCTTT CGGTGTATAC ATCGTCAGTA ACTCTATCTG ATCATAGAAA CCGAGGAGCG
TTTCCAATTC ATTTGGCAGC CAAGACACGT GAATACAGTC CACGCAACTA CGAGAGGCCA
ATCCTGGAAA GCGAATGTGT CCTCGATATG ATTGTAGCAG CCAATCCCAA GGGTGCCTTT
CGTCGCTGTG AACGCAGACT GCCACTGCAC TTCGCGATTG ACTCAGGCAA AACGTGGACG
TCGATTGCGA ATTTGGTCAG TGCCAACAAC GATGCTTTAA ATAAGAAAGA TCCTGTATCT
GGCTTATATC CGTTTCAACA AGTCGCATCG TACTCGAACA AAAGCCAGGC TGACACATTC
CGGGTCATGT GTGTTACTCG CAACAAATAT TCACACGCAG TCTGGAAGGG ACTTTCAGAT
AGGCAAAAGG ACGCCGCAGT CGCTCGAGTT TTTGAAACGG AGGATAGAAA TAGGCTTTGG
ACGATATTTG AGTGCCTTCG ACGGCAAGTG AACGTGATCG ATACCACCGA ATATCAAAGG
AGTCCTGTGG ATATGGCTCA GGGGTGTTCC GGAGTGGGCT TGATTGCTAC GCATTTCTTG
TCGTGGTGCT ACACGTTAAA TCAGAGCCAG GAACATTGGC GCGCGAACAT CGAGAACGTA
GAGACTCTTC GGAGAGCAGA GCAGTTGCTG TTGTCTGGCG GAAATCTAGA GGGCATGACA
TCTGACTTTT TGAATTGGCT CAGTAAGCTC CGATTTTGCA TTGAAAATAG TTCTCAATCG
AGCTCGCGGC AGCGTCACTT ACCAATACAA CGAGAAGAGG ACAAATTCCT TTTGCATAAC
GCCCTTTCCA ACCCTGGAAC ACCCCCACAA ATCATACGGT TCTTGCTGTC ATTGTCCCCC
GATTCCATTT TCATTCCGCT CCCTGGTACT GATAGTCTGC CTTTGCACAT AATTTGCCAG
ACAATACCTT ACACGGCTAT GAGATTCGAA CCCATACACA TCGGATCGAT GAAACTTGTC
TTGGACGCGA ACCCCGAAGT TGTCAACGTT TCATCGAGAG GCCAACTCCC ACTGCACATA
GCCATTCTTG CAGGAAAGAC TTGGGAGGAC TTAAAGCCTT TAGTTTTCAC ACACACTGGT
GCTTTACAGG TTAAAGATGC CGAAAGAAAT CTCTACCCGT TTCAGCTCAT GGCTGTGGAA
CGCTCGTATT CCGTCGATCT ACGTCTTCAT TTGCAGTACA AAGCTCGAAA CGCCTTCAAG
ACCTCAACCT GGAATCAGCT CTCTCCACTC GATCAGATTA AAATGTTCCG TCGCGTTCAG
CGTGAATACC AATTAAATGT GTTATCGTCT GTATTTGAGC TACTGCGAAC TGATTCCTCA
GTGCTTGAAC ACTCTGGCTC TGCTATTGAG TGGTCGAAGC TGAAGGACTT ACCAAAAGAA
ATCGAAGGCC AAGATGCTGA CGAACCAAAC AGAGAAACCA GTGACGCCAC TGACTGTGAA
CAACTCGAGT CGTTTTTCAC TTGCAAAGGA GACAGTATGT CAAGCAGAAC TGTCGTTGGT
TTGACAACCA ATATAAAGGA CCAAGACTCT GACATTTATC TAGGAGAATC AGGGCTCAAG
ACCTTTCTTT CAAAACAAAG CTCAAGGCAC ACACATGCCG ATCAATTTAA ATGCGAAGTG
TCAGTCCTTT CAATCGTTGA CGTGATGTCA ATTGTTTCTA CATTGGCCCA AGTAGATTCA
AAACATTTAC AAAAGAGAAA GAGAAACGGC GATGTCAGAG TCGAGTTATC ACAGAGGGAC
GATTCAGAGA GCAGCTATGA GTTTGCGGAA GATTTGATTG AAATCGATGC TACACTTCAT
AACACAGCTC CGGAGAATTC GACAGGAGGC ATTGTCGCCG AGAAGGAAGA TAAAGAGGCT
CTGTTGCACG ACAACGAAAG TGAACACGGC CGCGACGGAA ATCCGATTCA GGAGAAGAAG
ACTTTTTTTC AGTTGCGACG AAAGGCAAGA AACTTTTCTA GAAAGGAGTG CGAACACCCT
ACTCAAGCCC GCTCCGTACG GAAGAGAGGT GATCCAATAT TGATGAGTTC TTCCTTCTCA
AATGGTAGTG CCTCAGTATC GTCTCCAATG CTAAGAGAGG CACTGGAGCG ATCGAGACGA
CATTCACGAC AACAAATGAA AGCTCCACCA CAGGGCCTGA GATGTTTGAA AAGCGACGAA
AAAGAGATAT TTCCGTTGAA GGAAATGACG AGAAATGTTG ACTCGATGCA GGTAGGAAAC
GGACGCTACG GAAGTCTGAT GCTCGGAAAT CTAGACCAGT CTTCGGACTG CGAAGAACAA
GAAATTATGG TTCTTGGAGA CTCTCTCCAA ATAAGCATGG AGCTATCGCC CCCGTCTTCT
GCGGTTCGAA AATGTTTTAG CCTACCGGAA GAGTCTGCAC ATTCAATGAC TGAAGTATCA
GCAATAGAAG AGGACATTAG AAGCATAGAG ATGATGTGGA TACACAGAGG AGAGTCTGTC
ACTGCGCGCA AAGGAAAGCG ACCTACTCAG TCGCTTCGTA AGGTCATTGT AGGAGAGAAA
CCCATTGCGA CCAATATTTC GCCCTTTTTG CGAGCAGAAG AGAATTTGAC TACAAATCGG
AGTTCCCCTT CTAACCTGGA ACGATTTCTG GAGCAGGAAA GATGCAAAAG GACATTCCAG
AAAACAATTC CAGAACCAGG GCAAAGTAGA CTCGAGCTCC CAGTACCTAC TCCAGGAAGG
GACATGGATG TTTTTTCGAG CTCAGGACGC GAATTGTCTG AATCAGATGC GAAAGAACAG
TTTTATTTTG ATTTTGCGAA GATGCGATGG GAAAAGCGAT CCAAAAAGTT GCAGTTTGCG
CATGGAGAAG ATATCGGTAG CACTCTAGCT GCATGTTCTT CAGTCAAGGC TGTACCATTC
TTTGATAGAG AGTCTATGCG CTGGAGGACA GTATCGGAAC AGATAGATTC TTTTTCAATA
TTGAAAGGAA AACAGTCTCT AAGACAAAGT CGAGAGCAGA GAAAAGAAGC GGGCTTTGAC
AAACACAGTA TGAAGTGGTT TTTCAAAGAA AAGTGCGAAG ACAGCTTCGG GGTACATATC
CATTAAAATT ACAGGAAGAA TCAAGAACAT AGTAACTCAG GCAAAAAAGA AATATCGCCT
TT
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| Protein sequence | MSSSDGRITQ LHIFSSPAKK AAGQTPSSTQ IHRALAERRI VRRLYRKDGD LPRIVFSSVD
WHRDIGYALH SGKWENVRHQ LSLVASYTST AIDPDNVDRR NGNRKKPFWR RLSLGVTTSR
TDSGRDPYGL LQIDRMGQTP LHLALSSRNS PTDVLMALIK IERRAASIRN YSARVPLFYA
VVYRHHIETA AALVDAFPEA MSLRDSKGLT PLSYAFEIAE QESVLCDIPR TYWMPASGQS
EEAAWQELQG ERWSMVRLLL ASATYPQTNL SVGGNTSMLI DAMMHSAPPI VISLLIGAST
SLLSHENRAT AFAASTLYTA ITRHYPLSIL VSLASKCPKD VRSARDETGM GLLAAHFISA
CFETKPNTYE WAVSPSFFSS IRECIVDQEM HEEGSAFVDW WRKVEFLIAF CAGEDPSRFP
KDLLLHAALT NSDTPPAIIR VLLSVYTSSV TLSDHRNRGA FPIHLAAKTR EYSPRNYERP
ILESECVLDM IVAANPKGAF RRCERRLPLH FAIDSGKTWT SIANLVSANN DALNKKDPVS
GLYPFQQVAS YSNKSQADTF RVMCVTRNKY SHAVWKGLSD RQKDAAVARV FETEDRNRLW
TIFECLRRQV NVIDTTEYQR SPVDMAQGCS GVGLIATHFL SWCYTLNQSQ EHWRANIENV
ETLRRAEQLL LSGGNLEGMT SDFLNWLSKL RFCIENSSQS SSRQRHLPIQ REEDKFLLHN
ALSNPGTPPQ IIRFLLSLSP DSIFIPLPGT DSLPLHIICQ TIPYTAMRFE PIHIGSMKLV
LDANPEVVNV SSRGQLPLHI AILAGKTWED LKPLVFTHTG ALQVKDAERN LYPFQLMAVE
RSYSVDLRLH LQYKARNAFK TSTWNQLSPL DQIKMFRRVQ REYQLNVLSS VFELLRTDSS
VLEHSGSAIE WSKLKDLPKE IEGQDADEPN RETSDATDCE QLESFFTCKG DSMSSRTVVG
LTTNIKDQDS DIYLGESGLK TFLSKQSSRH THADQFKCEV SVLSIVDVMS IVSTLAQVDS
KHLQKRKRNG DVRVELSQRD DSESSYEFAE DLIEIDATLH NTAPENSTGG IVAEKEDKEA
LLHDNESEHG RDGNPIQEKK TFFQLRRKAR NFSRKECEHP TQARSVRKRG DPILMSSSFS
NGSASVSSPM LREALERSRR HSRQQMKAPP QGLRCLKSDE KEIFPLKEMT RNVDSMQVGN
GRYGSLMLGN LDQSSDCEEQ EIMVLGDSLQ ISMELSPPSS AVRKCFSLPE ESAHSMTEVS
AIEEDIRSIE MMWIHRGESV TARKGKRPTQ SLRKVIVGEK PIATNISPFL RAEENLTTNR
SSPSNLERFL EQERCKRTFQ KTIPEPGQSR LELPVPTPGR DMDVFSSSGR ELSESDAKEQ
FYFDFAKMRW EKRSKKLQFA HGEDIGSTLA ACSSVKAVPF FDRESMRWRT VSEQIDSFSI
LKGKQSLRQS REQRKEAGFD KHSMKWFFKE KCEDSFGVHI H
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