| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45072 |
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| Symbol | |
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| ID | 7199934 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011674 |
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| Strand | - |
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| Start bp | 116957 |
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| End bp | 120740 |
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| Gene Length | 3784 bp |
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| Protein Length | 947 aa |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179364 |
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| Protein GI | 219117139 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTCGC CGTCCAACGA GGATCGCAGC GACCAGGACG CGTTCGTCGG TGAATGGATC
GACAAGTACT TTGTCGAATT GGACGAAGTC TACCGCGGAC GCATCGTCTC CCAGTCCGCA
CACAGCACCA ATACCCACAC CAACAGCAAC ACCGACACAC ATACCAGTGC ACTCTGGAAG
GTTTACTATC CGGCGGATCC CACCAAGTCG TACCCCGATT CGGACGTGGA AGAGTTGGAT
TGGGACGAAG TACAAACCGG TATTGCCCTC TATCGACAGC GGAACGGCAA GGAGAAGGAG
AACGGCAAGA CCAAGACGTT CGCAACCCGA ACGAGTCCCC GTACGCCGTC GTCCAATCAA
GCAACCTCAC CCCGCACGTT CGTCTCCTCG GCTACGTCAA CCTCCATCTC AACAACTTCC
GCGTCGTCAA CCTCCTCAAC AACAACGACA TCCTCAACAA CAAGCTTACC CAAGGTACGG
AGGACTTCCC GCCGACGCAG CGTTACGCAA TCCTCGTACC GCGACGAAGC CTCCGTTGAA
AGTGCCGACG ACGAAACGTA CCGGACCGCG CGACGCAGCC CACGAACTCG GACGTCCCCA
CCGCGCGCAT TGGACGCCCA GTTGGCCGTC GAACCTCCAT CCAAGCGCTC CCGGACGGCA
GTGTCCCGGA GTACGACACG ACGCTCGTCC CCGACGTCGT CCCGTTCCAC CGCCTTGCCC
TGTGCGTTTG CGGTCCTCAT GGGAGCCCGA CCCGCTCCAC GCAAGGCTCG AACCGCGAAG
GACTCGGTCG CCAATGCCCC CTCACACCAC CCCTCCTCCG CCCCGGAACA CGGCCCGTTA
CTAGTCCCGC CAACACGGAC GCAGACGCAG ACACCAACTA CGTCCCACGC TGTCGAAGGC
AATCCCATGG CCGACGGATC GCGGTTCGTC AAGAAACCCT ACACGGCAGG GGACGACTTG
CCCGTACTGG CCCAACCGCA CGCCATGTTC GACGATCTCG TCGCCAATCT CACGGACCAC
GGCCGCAACA TACACGTTCT CTGGCCCTTG GTGGAAACCT TCCGCTCCCG CACCTTGCGC
GTCGCGACCA TGTGTTCCGG AACGGAAGCA CCCGTACTGG CCCTCGATCT GTTGCAAACC
TCGCTCCGAC ACGCCTTGCG GCGGCACGCC GCCGATGAAT TGCGGACGCG CGGCATTGAC
GTGGCCAACG TCCTGCGCAT CGAACACGTC TTTTCCTGCG AAATTGAACC ATTCAAACAG
GCCTACATTG AACGCAACTT TCGTCCGCCT CTCCTCTTTC GGGATATCCG GGAACTGGGA
CAGCCACAGG CCTACACTGC CTACGGCGCC TTGCGAGACG TCCCCAACCG ACCCGGTTGT
GTCGATGTGC TCGTGGCCGG AACGTCCTGT GTCGATTATT CCAATCTGAA CAACCAAAAG
GTGAGTCCCA ATGGGTTGTT TGTGCCGAGC GGTGCTGTGT AAGACAACGG GTGGGTCCAC
GGAGGGCTGT GTCCATGCGG TGCACTATGT GCACCGTTAT ACAACGTACG GAACCGTAGG
TTTCTGACGA ACGTCCTTTT GCTGTCGATA TCTTTGTAGA AACACATTGA CCAAAAGGGC
GAAAGTGGAC AAACATTCCA CGGAATGATG GACTGGGTTG ACCTGGCGCA ACCTCCCATT
GTCATTATCG AAAACGTCAG TGGAGCTCCC TGGGAAATCA AGGTGAAAAT GTTTGAAGAA
CGCGGGTACG CCGCCACCTT TTTGCGTATC GATACCAAAG AATACTACAT TCCCCAAACA
CGCAAACGCG GTTACTTGTT CGCGATTAAA GCTCAGACCA AGAACAAAGT AGTTGACCGT
CCCGCGCGAT GGACGGCCGC GGTCAAATCG TTGAAACGAC CAGCGTCGGC GGCGTTGGAC
GACTTCATGT TGCCCAACGA TGATCCGCGA GTTTTACGCG GCCGAGCTCG TCTCACGGCC
GAAAGCAGCG CCGGTGAAGG AGAGGGCCGC ACGCGGACCG TGGACTGGAC CAAGTGCGAA
ACCAATCATC AGCAAGCGCG CTCCATGGAG GAGTTGGGCG ATAAGCGACC TTTGACCAAC
TGGTCCGATT CCGGCAATAC GGCCATGCCG AGTTTCGGTT GGAACGAGTG GACTAACGCC
CAAGTACACC GAATCCACGA CTTGATGGAC ATCAATGCAC TACGCTTGGC AAAACTCATG
ATCGACTGCT CGCACAAAAC CATGGTGTGG AATTTGTCGC AAAATGTTCA CCGGGATACG
ATGGGTGTGG TACGTTGTTA CGTCTTCCGC TGCATTCGTA GTCGTATCTC GTTCCCGTTC
TTGTTGCTAA CCGGCCTTTC CTCTTTTTCC TACAGCTCGG TCTATCTCAG TGTCTCACAC
CAACTGGAGT GTTTTACGTG GCAAATCGCG GAGGGCCACT CGTTGGTGAG GAGCTTTTGA
TGCTACAGGG TATCCCCGCC GAAGATCTAC TGCTGACGAA AGAGTCGGAA GCGAATCTAA
AGGTAAGCCG TCGGTGGAAG TGCGTTGCCT TTTGCCGGTC CACGCTCGAT TTCACCGTTA
ACGTCTGTAC CTTTGTGCTT AGGATTTTGC CGGCAACGGA ATGAGTACAA CGGTTGTCGG
TACAGTAATG CTCTGTGCCC TGCTGCACGG TCACGACATT CTAAGAGGTG GCAACGAGCG
CGAGGCCTCG TCGGCTGTTG TACCAAGTCT GGTGCCCCGA TCCATCACAG CTCCCTCGGA
TGCGTCTATA TCGCTAGAAT TTGCACACTA CGCTAAGGAA AAACTCGAGC TTGGACCGAG
GTCTTCGCTC GGGCGCGAGG ACTGGTCGAA ACTACTGAGC GCAGCGTCGT CGTCCTCGAA
AAAGTGCATC ACCGAAGGAA AGTACGAATC TCTGCCGCCG GGAGAGCTAG TGACGTGCCA
GGAATGTGGC TTTACTTCGA GTAAGAGCAA TGCCGTTCCC CCACGAAAAT ATGAAGAGCA
TCATTTTGTG CCGAACGCAG GCAGCAATCC ACGCGTTCAT CCAGCCGATC TGCGTGAAGA
GCTTTTGAAA TTGCTGCCAA TGAGGGCGCA AGCACAGAAT TTTGATCTTG ACACTCTGTC
CCCATTGGAT ACTGTTTCGA AGAAGTTGTG GCAGGAATGG AAAGTTGCGG TCAAGGCTAC
TCTCTACGAG TCGGATGCTA CCGGGGCCAT ATTCCTCTTC AAGGAGATTA CCCGCACCCA
CATTTGGACG GCGCATTTTG GTTCCAGGAA TGGAGGACGG CTGGAGATGC GCATATCAAA
GTCCAAAATC ACTTGGTTAC TTTTTGCGAA GCCACCTTCG GAAAAGGGTG AGCTACGGGA
CATTTTGTCT CGCCCGGTGG CAAGACTGTG CGTTCGTGCA CCAAACGATT CAACGGTTCC
TGTCACGCTT CTAACAGGAT CGTGGGAGCT TTGTCTTCCG GAAACGATAG CTTGTACTAT
TCTCGTTGAA GGTAGTGGTG ATACAATTCC AAGTTGGCGC AACAGACTGG GACTCAAAGG
TGGCTTTGAA ACAGAACGTC AGTTCTCGCG GTTGAAAGTC ACTTTAGAGA GTTCGGTCCT
TCCTGATTTA AAGGCAGTCA TTGACGGCGT GTACGCTGCG CTACCTCAAT GTGGAGGCGC
CTGCGGCTCT TTGCGGAAGA AAGAAAAGAG GCGAGATACT GAGCCAGATC TATTCTTCTT
TTTGGAATCG GGTCGGAAGT CACTACCGGG CGACGACACT TACATCTTTT CCCCAACATG
TCAT
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| Protein sequence | MASPSNEDRS DQDAFVGEWI DKYFVELDEV YRGRIVSQSA HSTNTHTNSN TDTHTSALWK
VYYPADPTKS YPDSDVEELD WDEVQTGIAL YRQRNGKEKE NGKTKTFATR TSPRTPSSNQ
ATSPRTFVSS ATSTSISTTS ASSTSSTTTT SSTTSLPKVR RTSRRRSVTQ SSYRDEASVE
SADDETYRTA RRSPRTRTSP PRALDAQLAV EPPSKRSRTA VSRSTTRRSS PTSSRSTALP
CAFAVLMGAR PAPRKARTAK DSVANAPSHH PSSAPEHGPL LVPPTRTQTQ TPTTSHAVEG
NPMADGSRFV KKPYTAGDDL PVLAQPHAMF DDLVANLTDH GRNIHVLWPL VETFRSRTLR
VATMCSGTEA PVLALDLLQT SLRHALRRHA ADELRTRGID VANVLRIEHV FSCEIEPFKQ
AYIERNFRPP LLFRDIRELG QPQAYTAYGA LRDVPNRPGC VDVLVAGTSC VDYSNLNNQK
KHIDQKGESG QTFHGMMDWV DLAQPPIVII ENVSGAPWEI KVKMFEERGY AATFLRIDTK
EYYIPQTRKR GYLFAIKAQT KNKVVDRPAR WTAAVKSLKR PASAALDDFM LPNDDPRVLR
GRARLTAESS AGEGEGRTRT VDWTKCETNH QQARSMEELG DKRPLTNWSD SGNTAMPSFG
WNEWTNAQVH RIHDLMDINA LRLAKLMIDC SHKTMVWNLS QNVHRDTMGV LGLSQCLTPT
GVFYVANRGG PLVGEELLML QGIPAEDLLL TKESEANLKD FAGNGMSTTV VGTVMLCALL
HGHDILRGGN EREASSAVVP SLVPRSITAP SDASISLEFA HYAKEKLELG PRSSLGREDW
SKLLSAASSS SKKCITEGKY ESLPPGELVT CQECGFTSKV VAGMESCGQG YSLRVGCYRG
HIPLQGDYPH PHLDGAFWFQ EWRTAGDAHI KVQNHLVTFC EATFGKG
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