Gene PHATRDRAFT_45060 details

Gene Information

• Locus tag: PHATRDRAFT_45060
• ID: 7199932
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: +
• Start bp: 82855
• End bp: 84983
• Gene Length: 2129 bp
• Protein Length: 567 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002179135
• Protein GI: 219116681

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCCGAGCCGA TCCGAAGCGA AGACCCATCA CAAACCTTTT CAGTCGAAAA AAAATAATAT 
AGAAACGTAG ATTGCCTTCG CTGTTCGACA TCCTTCGTCT GGAAGCTTCG CAAATCTCTA 
CGGCGCGACC AAACTCCATT CAAGCTCGTA CTCACAGACA ATTCTCCCAC AAACGAGAAC 
GAAGTGACAT CTTGGTCTTT GTGTATTGTT CGGATAACGA AAGACTCAAT CAAGTTTTCT 
TGTTCTCATC CCGATTTGTA TACACGCGGT AACCAACGAG TAACTAACAA CAACTTGCAA 
CCATTCGTAC AAAATACTGC ATCACCATGA CGACGACTAC TACTGCGACA ACCTTTCCCC 
ATCCCAGCAC TATCGATGAC CTTCTCTCAC GAGATTCTTC CCGTCCTCGC TTGGTATCTT 
GGGATGGCTT GGAAACCAAC GAGACGGCCG ACGACCAGGT CCGTCCCGTG GGATTCGGCA 
AGAACCACCG AACATCCTAC CACAGCTCCA GTATGAGTAC TTCGACCGAT ATCTCCGACT 
ACAATACGGC TGCCATGACC AGTCGGTCCT CCTCGGGTTC CTTGGAATCC GTAGCCTCCG 
AAACTACCAA CGCTGCTTCC GTCAACAACC CTGCACTCCC AAGGGTATCC GTTTCCGTTA 
CGCCTTTGCC AACGTCAACG TTGCCCTTGC CCCTCAAGCG TAAGCGATCC AACGTTCGCT 
CCAGCCGTAC CACACGCAAG CATCAGCAAC AACAACACAG GACGACGTCG GTCCAAACAC 
TGGATCGACT GTCTGACGAT CTCCAACTCT ACATTTCCAG CTTTTTGGAA ACCTCCGATA 
TTCGCCGCGT AATGCAGGTC TCGCATCGCT ACCGTCGCGT CTTTGTGTCT GACGAATCGG 
AAGGTCTCTG GAAGGATCTC GTACACCGCG CCTGGCCTTG GCTTAAAACC GAACAAGCCG 
TGCTCGTGGA CGCCCTGGAT CTACCTACAC CCTGTCCCGA AGGCACCAAC TCGGCCAATA 
TGAGCCTCCT CCTATCGTTG GCTTGCGAAA AGGCCACTTG TGTCGACGAA TCGCACTTTT 
CACCCGTCAA GTGGAGCCGC TCACTCCGTC GCTGGAGACC GCGCAACAAC GCCGTCGCGG 
AACTCCAAAC CGTCCTCGCC AGCAACGGCA TTCCCGCCGT GCAATTCACC GGACTCGTCG 
GCAAAGGTGA TCGCTGCATC CGTGCCGATC ACCCACTCGC GCGCCCGCAG GCGCTGGATC 
ACAAGACCAA CTTTACGACG ATCCACAATC GGTCCCCCGT AGCGTCGAGC AAGAAGAAGG 
CGGCGCAGTT CTTGCACAAA CTCTGTTGTT CCACTAAATC CGCCACCGAA CAGCGCTGGC 
GACCCTTTGT CGCTCCCTTT CGCGCCTCGA TTGGGTCTTC TGCACCCGAT ACGACACTTT 
CCGGAACTCA CGAAGACGTT TACGTGCATT TGACGCCCCG CCTCATTTCG TATTTCGAGG 
TCCGTATCCT CGAAGCGCCT CGTCGTCTCA ACGAACCGAC TACACTCGAC GCTTTTCGCA 
ACCACAACCT TACCGCAAAC GGCATTACCG CGTCCGAATG CGTCGCGGTT GGCATTGCCA 
ATGCCGCGTT TACGCTCCAC GCCCGTATGC CCGGCTGGGA TCCACATTCG TACGGTTACC 
ACGGTGACGA CGGCGGTATT TTCCACGCAT CGGGTCACAT GGTCAAAACC TACGGTCCCA 
CGTACGGTGT GGGCGATGTG GTCGGCTGCG GCATTGACTA CGTCCACGGT GTCGTCTTTT 
ACACCCTCAA CGGACGGTAT CTGGGACAAG CCTTTGTTCT GTCGCCGGAC GATTTACACC 
GCGACTGGTA TCCCGTCGTG GGTATGGATA CCAACTGCCT CGTGCAGTGT AATTTTGGAG 
TCCACGAACC CTTTCTCTTT GATTTGCAAC GCAAAATTGA ATCGCAACGG CATTTGATTG 
TAGACACGTT GTTGCAATCG CGGTCGTCCC CGACGCCGCG AAGAAGTTGA AGTCTGAACA 
GTAATACTTA TAGTTCCATG GGGTACTTGC ATATTGAGCA CTCTTCGTGT AAGTAGGAAG 
TAATTTTATT AATAGAAGGA AAGTGTGGC 

 

Protein sequence

MTTTTTATTF PHPSTIDDLL SRDSSRPRLV SWDGLETNET ADDQVRPVGF GKNHRTSYHS 
SSMSTSTDIS DYNTAAMTSR SSSGSLESVA SETTNAASVN NPALPRVSVS VTPLPTSTLP 
LPLKRKRSNV RSSRTTRKHQ QQQHRTTSVQ TLDRLSDDLQ LYISSFLETS DIRRVMQVSH 
RYRRVFVSDE SEGLWKDLVH RAWPWLKTEQ AVLVDALDLP TPCPEGTNSA NMSLLLSLAC 
EKATCVDESH FSPVKWSRSL RRWRPRNNAV AELQTVLASN GIPAVQFTGL VGKGDRCIRA 
DHPLARPQAL DHKTNFTTIH NRSPVASSKK KAAQFLHKLC CSTKSATEQR WRPFVAPFRA 
SIGSSAPDTT LSGTHEDVYV HLTPRLISYF EVRILEAPRR LNEPTTLDAF RNHNLTANGI 
TASECVAVGI ANAAFTLHAR MPGWDPHSYG YHGDDGGIFH ASGHMVKTYG PTYGVGDVVG 
CGIDYVHGVV FYTLNGRYLG QAFVLSPDDL HRDWYPVVGM DTNCLVQCNF GVHEPFLFDL 
QRKIESQRHL IVDTLLQSRS SPTPRRS