Gene PHATRDRAFT_45024 details

Gene Information

• Locus tag: PHATRDRAFT_45024
• ID: 7199532
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: +
• Start bp: 1037921
• End bp: 1040060
• Gene Length: 2140 bp
• Protein Length: 560 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002178901
• Protein GI: 219116212

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AAAAAGGGCT TCACAACGAC GACGTTTTCC CCCACAATCC CGACGACACC TAGCGAAACA 
CATTTCTTTG TACTTTACGC CAGTCCCTTG TTTCCGACCT GATTCACAGG TCAGCGACTG 
TGCACGAGGT GATTTGGTGA TTTGTCTGTG CCGTGAGAAA AAAAGTCAAG ATAAAAAAGC 
AAGCTTTTTT CCACAGCATG AGAAGAAGCG TGTGGTAACA TTTATCATAT TGACTGATAG 
ATTGATTGAC TGACTGATTT GTCAACCAAT CGATTGCTTG ATTCGTTCAC GTACTGAACC 
AACCGACTGG AGAACACGGG CTGACTGTGT ACTTCCTACA AACCTGCCTA CCTGCCTATC 
TATCAACTTA CCTGCATGAG TGTTTTCTAC TGCGGATTAC CTGTTGATTG CAAGACTCGT 
GGTTGATTCG AACCTTTCTT CCTGTGACTA CACCGACATG AGTGACCACC GCCATTCCCT 
TTTGCCGTCA CAGGCGTCCA ACCGAAGACT ACGCACGCCT CCACAAAGCA CAGCCTTTGT 
CGCGCTGGAA ATAGAATCCT TGGTCTTGAA CCCATCTTCC CAAGGCAGTA TCCACAATCA 
AAACGTCGCC ACCGCCACGA ATACGACCAT TGCGGATAGA TCCATGTTCT CCTACTCGCC 
AGCCACACGC ATGTTGTTGG AAGAGTCCAT GCGTTCCATC ACCAACAGTC GCTGGCACGT 
GCGATCACTC GTCAAGCTTA TTTGTTTATT AGTGGCCGTA GCTGTTGCCT TGAACGTGAT 
TGCTAGTACC AGAATGGTAG TCCGTGGCGA ACGTACCGAA GACAAGAACA AAACCGGAGT 
ACTGCCCGAC CACAACAAAA AAAGCAACAA ACTGGCACCA ACCGAAGCGC CAACCGTACT 
ACCTTCATTT TCTCCAACCA CTTCACCATC CACCCTTTTA CCCACGATGG TACCGCTTTC 
ACCAACGTCG GCAGCCACAA TACCACTCAC ACCAGAAGCA CAACAGCAGG AGCAACAATC 
TTCATCGTCC AAAGCGTGGA TTCAACTGCA ACCACGCGAT TCCGACAAGA AGCCCTACCC 
GCCTCCTGGA AAGAATGCAT CCCTCACTTT TCAGTCCCGA TGGTGCGATT TGCAAGGCCT 
AGCCTTTGGT ACCGAAGCTG ACTGGAACCC GTCCATAGCC ACGAAGCGCG GAAAATTCGC 
TCCCAATATC ACAAACGCAA CGAATGCCTG GCAACTCCGT GCACCGTCTT TGCTGCTTCC 
CGGCACCAAA CACGCCGGAA GTGAAGCACT GGGTGCGTTG CTGGCAACGC ATCCTCTCGT 
GTTACGCCAA ACCACACAAG GATTCTTCTT CGACCACGTC TTTCGAAAAT TTGTTTCCGC 
TAACGAAAAA ACCCGAGTCG CGGCTGCGCG GCATAAGATG TACGCTTCAC ATTACGACTT 
AAAAGCTATC CAAGCTAATC CTGCCCTGCG GAGTGTGGAT GTTACACCAG GGTATCTGCT 
TTACAGTACA TTGTTGCCGC GACGTGTGTT CTGTGTCACA CCATGGATAA AACTCTTAGT 
GGTGCTACGG AATCCTACGG ACCGTGTATT CGAACACTAT CAAGCGGCCC GTGCCAAGGG 
TTTGCCTTTG TCGCTCAAGG ACTGGTTGGA CAAGGACTTG GCGATTTTGC GCAAACATGG 
CTTGGTGGGG GATGCCACTG GGATGGGTAA CGCCACGAGC ATAGTCAAGC ACGGGTCGTC 
CGAAGAAGAC GTGGCCTGGC TCAAGTACCA GGACGAATCA CTGGAAGGCG TCATCGGACG 
ATCAATTTAC GAAATACAGT TGCGGCAGTG GTTTCAGGCA ATGCGAGCGG CCGGCAAAAA 
TCCGTCCAAG GATGTGATGG TAGTATTGAG TGACGATTGG TCACAAAATC CGTCTCGAAA 
ATATCAGCGT GTGCTAGAGT TTGCCAATCT ACCCCACGAT GACAATGTGG TGGTTCCTAC 
CACATTGTTG GCTTCTACCT GGCGTCGTAC AACTGGCATA AACCAGACTC TAGCAAGCTC 
AGGATCTACG GCCACACGCG ACGAACTGCA AAAGTTTTTC CGGCCTTACA ATACCAGACT 
TGCCTTGCTC CTGTCCTCAT ATGGAGTCAC GGTGTTATAG 

 

Protein sequence

MSDHRHSLLP SQASNRRLRT PPQSTAFVAL EIESLVLNPS SQGSIHNQNV ATATNTTIAD 
RSMFSYSPAT RMLLEESMRS ITNSRWHVRS LVKLICLLVA VAVALNVIAS TRMVVRGERT 
EDKNKTGVLP DHNKKSNKLA PTEAPTVLPS FSPTTSPSTL LPTMVPLSPT SAATIPLTPE 
AQQQEQQSSS SKAWIQLQPR DSDKKPYPPP GKNASLTFQS RWCDLQGLAF GTEADWNPSI 
ATKRGKFAPN ITNATNAWQL RAPSLLLPGT KHAGSEALGA LLATHPLVLR QTTQGFFFDH 
VFRKFVSANE KTRVAAARHK MYASHYDLKA IQANPALRSV DVTPGYLLYS TLLPRRVFCV 
TPWIKLLVVL RNPTDRVFEH YQAARAKGLP LSLKDWLDKD LAILRKHGLV GDATGMGNAT 
SIVKHGSSEE DVAWLKYQDE SLEGVIGRSI YEIQLRQWFQ AMRAAGKNPS KDVMVVLSDD 
WSQNPSRKYQ RVLEFANLPH DDNVVVPTTL LASTWRRTTG INQTLASSGS TATRDELQKF 
FRPYNTRLAL LLSSYGVTVL