Gene PHATRDRAFT_44982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44982 
Symbol 
ID7199504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp885837 
End bp887040 
Gene Length1204 bp 
Protein Length203 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178869 
Protein GI219116148 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGGTA GCCGTACGCT CTTGAAATAC GCCAGTCCAT TACGGCGCAA AATCTCGATG 
CGATGGGCAA GCGCTGTCGG TCAGCATCCG ATTCGAGGGA ATATTCCAAT TCATGGACAC
GGTATTGCAC TAGAACAGTA TGCTGAAGTT GATCGAGCAT TTTCCGAGGA AGAAGTTCGG
GCTTTCGGAA TGTTAGTCAA CGACATGAAT CCTTTGCATC GGTCTTGGTC GATCAGGGAT
GACTTGCCGA GCGAAATCCA GGATCATGAT ATGCTCCACT GGGACGAAAC GTCTCGCCGC
AGCAAAGTTC TTGTACACGG AATGCTTGCA TCGACTTTGT TCACCTCCAT TTTCGGAACG
CTGATTCCTG GAGCGGTGTA TTTGTCGCAA CATTTAGATT TTCGAAAACC GGTTTTCGCG
AATGAACTCG TTACTGGTCG AGTTGTCATT GATAGAATAC GGCAAATGAA AAGGAAAGGA
TTAATCGTTA CATGCAGTAC CCGAATTGTG TCTGGAGACG AAGTATGCAT CCGAGGAGAT
GCAAATGTTT GGATACTAAA TGGTACCCTG GAAAAGGAAA CGTATGCAAC CTTCGACGCA
ACCGCGAAAT GAATAGCCAG ATAATCTACG AAGAAAAGGG TAACACTATT TTCCCATCGC
TCTGTAACAT ATGTTTTCTG GCGTAGCCTG CAATAAGAAT CACAACCGTC CATACGATGG
CCATCAGTTT TATTAGGCTC TCATCGACGC CTGCCTCCGG AGATGGACCT GTTTTAGAAG
CCAGGGAGCG ATTTTCCTTC TTTTTTATAA ATTTGAGGTC CGCTTCCTTT AGTTCATCGA
CCAATTCTCT CTTTATGAGA GATGACACAG TATCAGTATC GGACAAGTCG TCGTCGCCAT
CATTAAAGGG TTCGGTACCA AGCCTCGATT CAAAGTCGGC CATTTCCGTA TTTTTCAAAC
GATAAACGGC GCCAGTTGGG CTGGGATCTG CGACCCGACG GATCGATTCC AGAATGGCGT
CCGTGTCCTT CGACAGCTTT TGTATCTCCT GGTCTAAGGT GCCTTCCCAA TCCTCTTTTG
TCCTCTGCGA AGGCGGGGGT TTTAAATCGA AGTTTCGCTG CCGCGAGGCA GAATTCATCT
GTACTTTGCT TGGCGTCGCG CTTATGTATA ATGTGAACGA TTCAAATGGA CGGCGTTTCA
CGCA
 
Protein sequence
MQGSRTLLKY ASPLRRKISM RWASAVGQHP IRGNIPIHGH GIALEQYAEV DRAFSEEEVR 
AFGMLVNDMN PLHRSWSIRD DLPSEIQDHD MLHWDETSRR SKVLVHGMLA STLFTSIFGT
LIPGAVYLSQ HLDFRKPVFA NELVTGRVVI DRIRQMKRKG LIVTCSTRIV SGDEVCIRGD
ANVWILNGTL EKETYATFDA TAK