Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44924 |
Symbol | |
ID | 7199829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | - |
Start bp | 653544 |
End bp | 656077 |
Gene Length | 2534 bp |
Protein Length | 743 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179040 |
Protein GI | 219116490 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGTTGACCG CGTACAAGCC AGCAACTGTC AGTCCGTCTT TACCGAGACG TTTGTGTCGA GCATATCACA ACCTGCTCAA AAACCCCAAA TAGAATTGTT CATCCTGACA AAAAGGTGCT GAAAGCCCCA CTTGGAGAGC AGAATGCAAG TTTGCGCAGT TTTGGCTGCG TTTTGGGTAG TCTCCACGGC TGCCTTCCAA GGGACGACGT GGCGAAGGTC TGAGGCGAAA GTGGTCTCCG CGAATCATAA AGGATCCACG ACTCTGCTCT ATGCGGAATC ATCTCGTCCT CCTTTTTTCA AGGACTTGAG AAATCCGTTT GCAGCGTTAG CCAAAGGGCC CCGTTCGAAT CCACAGCCTG GCGATACCTT TGCCGATTTC GACCCGTCCC CTTCCGGGCT CGTCCGTCGC ACCAAACTGG TGCTGGCTAC CGACCTCGGT CTGCAAGATC CCTCCCTGCT AGACGACCAG GAATTCAAAT GCATCAGTCC AGGGTTGGAC CAACCACTCG GAAAGACCGA CTACATTGCC GCCGGACGAT TTTTCGATTT GCGCGGAACG TTTCCCGATC TCGACTACCG TGCCCACGAT TTTCGTATTG ACGAGACTGA CCCCAAGACG GTGCGTTTGA CTTGTCGCGT TACCGGAACA ATGCGTGGAG AGTTGCGCTT GCGGACGGCG AACCTGCCAC CGACCAATAT CGTCATGTTC TGTCCTCCGG AAGCCGTCAG TATGACTTTT AATGACCAAG GCAAGGTGAC GAAATTGTGT ATGGGATTTT GTATGGATCG TCAGGTAGGC AACACCCAAG GGACGACTGG TGTACAAGCT GCAGCAACGA TTGCTGGACA GCCTCCGTCA AATTGGGAGT TGTATCCAGG ATTGTCAGTC GTAAAACGGT TTTTCGGACG TCCTGTTACA CCAATCGTTG AAAACAATGC TATTTTGGCT CCGTTTCCAG AGACCGTCAT GGTGCAACTT GCCAAAGGTG TTTTGGGCTC TAACATGGGC TTAGAAGATC CTACGCTCCT TTCCAACGAC TTTGCGTATT CGACACCGTT TATTGCGCCT GTCTCCAAAT TCTCATTCTT ATCCAACTAT GCCGCTGAAG AGTTTGCCAA TATTGATCCT TCACTTTCGC ATTTTCGAAT AGACCCTTAC AACCCTACAC GTGTTTGGGT TGATGTGAAG CCTTCGGCAC CTGGTTACGA GGGTGCTCCT CAGTCATACA GTTTCACGTT TGATGATGAG GGCTTTTGTA CGCGCGTAAC AGCTCGCTAC GTTCTTGACC CATCGATCGG CAATGGTGGC GGGCTCGGCG GACCGGACGG CTACAAATAC GCCCTCAATG ACGCTCCATC AGATCTGTTG ACGCGCCCTC TTCCAGAAGC AGTCGGTCGT TTTCGCAAAA AGATTCTCTC GCCGATTACC GGAGTTGGTG TTGATGACTA TAAACTCCCT GGTGAAGTCA AAAAAATTAT TCCTCCGAAG CCGCCGACGG TTGGTCCTAA TGGCAAAAGC ATGGCACCGG AACCACTCAG TAAACTACAG AGTATTTCTC GTGAACCACC ACAGCAAGAT GAAGGCACTC GAAAGGCTGA GCAAGAAAAA CGGGTACGGG CCCAGAAACG AGCACAGCAA GAAGCTCGAC TACAAGCTGA GCAGCAGCAA AAAAACCAAG CATCCCTTTC AGCACCATCT TTGCAAAAAA AGCCTTCCTA TGCAAAGCCT ACCCTAAATC CGATGTTCGT CAATCCTAAG GCTACTTTGA CAGCGGCTCA GAAAGCAGCT GATTCCAAGA AACTAGTCGA GACAAGAAAT GTTGAAACGG CAAAAAAGAA GGCAGAAGCT AAACGGCAAA AGAAAATTGA GCAGAAAAGG GTTGAAGAAG AACAAAAGAG GCAAGCGGTA TCACGAGATT TAAAGCAATC TAAAAGTATA TCTCAGGAAC AAACGCGGCT GAGAAAAGAT CAAGACGGGA AGGACTTTGA AAAACGGAGG CGAAAAGCTG AGCAGGTCAA AGAAGCCGCC AAGGTTGCCG CGGAAGATCG AAGGAAACGA CAAGAAGCGG CTCTGGACGC CCTTTCCAGA GCTGTTAAGA GCGCAACCAT TTCACTGTTT CGACTTGGTA GCGGCAGGGA CGAACCTGAT GAGCTGCCCG AACAGACACC GCCAACCTCT AAAAAAGCAC CACCTGGTGT GCCAGCTATT ACTCGGTGGC GTCAAAATGA TGACGGTTCG GTTACAGGAT TAATTTCTGG TTCGCTCAAC TTTAGGAGTG GTGAACGGGT CACAACAAGT CCCATTTCCA GCGGCAAGGT TCAAGCAGGT GAGGTTGTGC GTACCGGTAG CGGCTCGCGG TATTTTCTCG CGTAGCACGC ATATAAAGAA ACCAGATTGA AATAGATCAG CTGGGACAGT TGTGTCAATT TGACTGCAAA TGCGGCTGGG TAGGACTTTC TGTGAACGAC AGCAAGATGC TCAAAAGATA GAGAAATCGA AATTATTTAT ACTTCACACC CGTTGCTGTC ATGA
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Protein sequence | MQVCAVLAAF WVVSTAAFQG TTWRRSEAKV VSANHKGSTT LLYAESSRPP FFKDLRNPFA ALAKGPRSNP QPGDTFADFD PSPSGLVRRT KLVLATDLGL QDPSLLDDQE FKCISPGLDQ PLGKTDYIAA GRFFDLRGTF PDLDYRAHDF RIDETDPKTV RLTCRVTGTM RGELRLRTAN LPPTNIVMFC PPEAVSMTFN DQGKVTKLCM GFCMDRQVGN TQGTTGVQAA ATIAGQPPSN WELYPGLSVV KRFFGRPVTP IVENNAILAP FPETVMVQLA KGVLGSNMGL EDPTLLSNDF AYSTPFIAPV SKFSFLSNYA AEEFANIDPS LSHFRIDPYN PTRVWVDVKP SAPGYEGAPQ SYSFTFDDEG FCTRVTARYV LDPSIGNGGG LGGPDGYKYA LNDAPSDLLT RPLPEAVGRF RKKILSPITG VGVDDYKLPG EVKKIIPPKP PTVGPNGKSM APEPLSKLQS ISREPPQQDE GTRKAEQEKR VRAQKRAQQE ARLQAEQQQK NQASLSAPSL QKKPSYAKPT LNPMFVNPKA TLTAAQKAAD SKKLVETRNV ETAKKKAEAK RQKKIEQKRV EEEQKRQAVS RDLKQSKSIS QEQTRLRKDQ DGKDFEKRRR KAEQVKEAAK VAAEDRRKRQ EAALDALSRA VKSATISLFR LGSGRDEPDE LPEQTPPTSK KAPPGVPAIT RWRQNDDGSV TGLISGSLNF RSGERVTTSP ISSGKVQAGE VVRTGSGSRY FLA
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