Gene PHATRDRAFT_44844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44844 
Symbol 
ID7199560 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011673 
Strand
Start bp416664 
End bp417978 
Gene Length1315 bp 
Protein Length424 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178996 
Protein GI219116402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTCA GCAAGAAATC ATTGTCGGCT CCCTGCTGCG TCCAAAAACT CTTTCTTCCT 
CCCACGTCAA TACTCGGATT CAGATAACAA CCATTACTTT TCATCTAGAA AGCTTCCACA
TTGTATACGA CACCGTCAGT GGAAATTGCG CGCTTCGCAG AGTCCATATT CAGCTTCCTC
GGAAGTATCG TCAGACGCCT TAGAACAAGC CCTCGGTGAG GAAGAGGAAG TACTTTTGTC
AGAAGAAGAT TTTTCAAGTT TGCCGATAGG AATTCCGAAG GGTTTCTTTG TAGTAAAGCA
ATACACGTTC TCTGCCGAGA AGGACTTCGA TTGGAGCCAA CTAGGGATAG ATCCGAAAGA
TGCGGAAAGG CTTGATCTCT CGCCACGAAA CGTGTCCTTA CCAATAGCAC TTATGATGGC
CGATCCTATT GACTTTCCTT CTTTTTCTCG TGCACGTAAA GCTTGTCGTA AAGGTAATGT
TTTGATTCAT CGAGGAGCTC TAAAGATGGA CGAAAAGACT CCAGAGTCAA CAATATTTGA
TCCATTAATG TGTGTCCGAG GCCGCGTGGG TGATCGGTTG TACCCAGGGG ACACCGTCGG
AAAGCAAGTT CGAATCGGCA GCGGGTATTT TCCTGTTTTG AACTATAAAA AGCCACCCTT
TGAGCTTCCA GTCATAATCG AAGATGACCA TTGGGCATTA GTGAACAAGC CCGCCGGCAT
CGTTGTTTAC AATCAAAGAA ATGGAGGACA CGGTATTATG ACCGTAAGGG CTGCGCTTCC
CTTTGTTCTC GCACCGCCGA AAGTAGGTAC CATTTCAGTG TTACGGCGAC CCGCATCGGT
TCATCGACTA GACAAACCTA CGAGTGGTAT ACTTTGCATT GCCAAAACGA AACCCGCCAT
GCTGTGTCTT TCGCGGCAGT TTCATGACCG TATAGTGAAG AAAACGTATT TTGCGGTCAT
AAACGGTATT CCAACCTATT CGAACGAATC GAAGATTTCT TCGAAGACCG CGTACGAACT
CGGAGTGGAT GTGGACCCCA ATGATCTTGA TGATTGGCAG CTAATCGACT CCCCTCTCGA
CGAAAAGAAG GCGGTTACTG TATGGAGGGT GGTCCGATCA ATCAAGTCGC TACATGCCAA
CGACGGATAT CTTACACTGG TCGAGTTGAA ACCTAAAACA GGGCGCTATC ATCAGCTGCG
ACGGCACATG GCGTGGGTTT GTCAGCGGCC TCTGGTAGGT GACGATGAAT ACGACGGAGG
GACCGAGTCT GCCATGAGGT TTCGCGATCG TGGTCTCTTC CTGTGTTCGA CCCGT
 
Protein sequence
MALSKKSLSA PCCVQKLFLP PTKLPHCIRH RQWKLRASQS PYSASSEVSS DALEQALGEE 
EEVLLSEEDF SSLPIGIPKG FFVVKQYTFS AEKDFDWSQL GIDPKDAERL DLSPRNVSLP
IALMMADPID FPSFSRARKA CRKGNVLIHR GALKMDEKTP ESTIFDPLMC VRGRVGDRLY
PGDTVGKQVR IGSGYFPVLN YKKPPFELPV IIEDDHWALV NKPAGIVVYN QRNGGHGIMT
VRAALPFVLA PPKVGTISVL RRPASVHRLD KPTSGILCIA KTKPAMLCLS RQFHDRIVKK
TYFAVINGIP TYSNESKISS KTAYELGVDV DPNDLDDWQL IDSPLDEKKA VTVWRVVRSI
KSLHANDGYL TLVELKPKTG RYHQLRRHMA WVCQRPLVGD DEYDGGTESA MRFRDRGLFL
CSTR