| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44793 |
|---|
| Symbol | |
|---|
| ID | 7199751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011673 |
|---|
| Strand | - |
|---|
| Start bp | 262306 |
|---|
| End bp | 263530 |
|---|
| Gene Length | 1225 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178963 |
|---|
| Protein GI | 219116336 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTTATCGTA TAAGCTTGGC GAGAAACGCA AATCTTTGGC TAAAAGACAA TGAGTCTCCT
TGCCGGGGAT GATCATCGAT TGCTCGCCGT TCGCGCCGTC GATTTGGTAT CGGCAATGGC
ACCGTCTGAT CTAGTTTTAG AAGCCTTTAG ACAAGAGCAT CCTAGCTTGA AAGAAGATTC
ATGTGCGGGC ACAACTGTCG CTGTACAAGA AATCTTTGGC TCCATGGTAA ACATTTTATA
CGAGGACGAA ATGGGTCCCT CGAAGCGGTA CCTACAGCGC CTTCTGCTCA AGTTTATTTC
CGTCGTCGTC GGTGAGGATC GCACCGAATC AGAAGCCCTT ATGCAGTTGC TCTTGAAGGG
ATTGAGCATC CGCAATTCCT TTCCCGACGC AAACGAATGC TGCCATGTTT CTTTTCGAAT
ACAAAGATTG CGTCACGAAA TACCCCTGCG CATTCGAATT TTCCCGCAAC ACAACGACGT
GGCGTTACGA ATGTGGGAAG CCGGCGCTGT CCTTTCAGAG TTCTTTGTCC AGTGTGGGGG
ACTTCTGGCA GGTCGCAAGG TCGTGGAGCT AGGTGCAGGA ACTGCGGTGA CTGGGCTCGT
CGCTGCGGGC TGTTGCAAGG CTTCGCATGT CCACTGTACT GACTTTACCC AGGCTTCGCT
TGACAATATG AAACATAATG TGGCAATCAA CGAACCTTGG TTGCGACAGA AAAGACCGAA
GGAGGAGCCG CAAAGTGTTA TCTCGTCTGG ATACCTCGAA TGGGGAGAGT TTGGAAATGG
CATTGACGAA AATCTGAATC CCGAAGCTGC TGTAAACCCG CTGCTGGTTC CTAGTGCGGA
CCACCTGATC CAAGGCGATA CTCTTATTGC TGCTGATGTA GTGTACGACA AAGCAATTCT
TAGTCCCTTG GTTCGAACAA TTTGGTATTT CCTAACAGCG ACTACCTCGA GCCCTCATGA
AAAGACTGCG ATCTTTGCTA CGACAATACG AAATCAAAGC ACATTCCAGC TGTTTCAAGA
GCAACTTCAT TCCCAAGGAA TATCATCCCA GATTTTACTT TCCCGCAAAG AGTGTGGTAA
TTTACAGCTT GTATTCCCAA TGAATTTCAT TCAGCCTCGG AGTGACGTCG TGATATACTC
CTTGCACCTG CAAAGGAAAC CTACGAAGTG ATGTACGTAT ACTATACATG TTGGGTAATC
ACTATAAATT ATCAAAGACC CGTTC
|
|---|
| Protein sequence | MSLLAGDDHR LLAVRAVDLV SAMAPSDLVL EAFRQEHPSL KEDSCAGTTV AVQEIFGSMV
NILYEDEMGP SKRYLQRLLL KFISVVVGED RTESEALMQL LLKGLSIRNS FPDANECCHV
SFRIQRLRHE IPLRIRIFPQ HNDVALRMWE AGAVLSEFFV QCGGLLAGRK VVELGAGTAV
TGLVAAGCCK ASHVHCTDFT QASLDNMKHN VAINEPWLRQ KRPKEEPQSV ISSGYLEWGE
FGNGIDENLN PEAAVNPLLV PSADHLIQGD TLIAADVVYD KAILSPLVRT IWYFLTATTS
SPHEKTAIFA TTIRNQSTFQ LFQEQLHSQG ISSQILLSRK ECGNLQLVFP MNFIQPRSDV
VIYSLHLQRK PTK
|
|---|
| |