| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44631 |
|---|
| Symbol | |
|---|
| ID | 7198119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011672 |
|---|
| Strand | - |
|---|
| Start bp | 1103086 |
|---|
| End bp | 1104453 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178641 |
|---|
| Protein GI | 219115691 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.160926 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TGACGGTTGT TTGGTCTGGA AACGTAGAGG ACAACTTGCA CTTACAGTAA ACTGTTACAA
AGCCTTTGCT GGATCGTTGG ATTCCGTTGC TCGTACGAAT TTCGGTATTC GACTCCCCTG
TTTCGAAGAA ACCTGAGCTT TTGGTATCGA GACCTACCGC TTGCTCCTCG TGCGTATTCC
GAAATACCCT GGCAAGGAAA TTAAGCGTGT CATTGTCAAC AAGCAACACA TGATGAACTC
TGCGTACGAC GACGAGGACG ACGACGGCGG GTTTGGACCG AATCCCTTTC GTGTCAACCA
TAACGATCTA TTGGATATAC CGTTGCCGAA TCCCACTCCT CAACAACAAC CACAACAACA
GTACGCGGCG TCCAATGTCA TGTTGAATCA GCCGTTGAAT CAACCGGATC CTCAGTCGGG
AATGACGGGT TCCTTTCAGT TGCCCCCTGC CTCTCCACCG TACCATCCGC CGCAAAACGT
ACAACAAGCA CAACAAAACC AGCAACAGCA CTTTCTACCG GGAAGTCCTT CGCAACTCCG
AGGAGCCATG GATCAGCAAG CACTCCCCGG TAGTCGCAAA GCTCCGTACG GTGGAACGGA
CGAAATCGCC TCCACGCCCA CGTCCTTGCT CAGTTGGCGT TCCTGTGTCA AGTGCGTTCG
TTTGGATTCC TACGTACAGT ACTTTGATAT GGACACTCGG GACATTTTGC TCCGTCTCAA
AGCCTCCGTC ACCACCTTTT GGCAACCCGA TCAATTCCGT ACCGCCGTGT TGGGAGATCC
ATCCACGGCC GACGAAAACG ATCTTTCCAA CTTGAAAGGC CCGGATTTGT ACGGACCTCT
TTGGGTGAGC ATGACTTTGA TTTTCGTTTT GGCCGTCACC AGCAACCTCT CGGCATATTT
GCATCACTGG CAAAAGGTAA AGCGCGCGGA CGATGCTACC CAAGTGGACG CTTTTGAATT
CGACATTCGC CATCTCGTGC GCGCCTCCAG TGTCGTCATG ACCATGACCG TGGGTGTCCC
CACGGTGCTC TTCTTGGCCT GCGTTTGTGT CGGCATGTCG GGCATTCCGT GGGCTCTCTG
GGTCTGTTGC TACGGATACG CCCAGGTCCC CTTTTTGTTG GCCGCGGCCG TTGTCTGGGT
TTGGCCGCAC GAAATCTGGG AATGGAGTGT GCTGCTTGCC GCCATGGTTG TATCCGGAAC
GCTTGTGCTG CGAAATATGA GTACACCGTT ACTCAGTCAA GACGTGTCCG CTAGTCAATC
CAAGGCGGCG CCGATCGCCA TTGCGATATT GGCGTGTCAC GTCATCTACG CCGGGGTCTT
GAAAGTGTCG TTTTACGAAT GAGTACGGCG TATTTATGAA ATAGTTGG
|
|---|
| Protein sequence | MMNSAYDDED DDGGFGPNPF RVNHNDLLDI PLPNPTPQQQ PQQQYAASNV MLNQPLNQPD
PQSGMTGSFQ LPPASPPYHP PQNVQQAQQN QQQHFLPGSP SQLRGAMDQQ ALPGSRKAPY
GGTDEIASTP TSLLSWRSCV KCVRLDSYVQ YFDMDTRDIL LRLKASVTTF WQPDQFRTAV
LGDPSTADEN DLSNLKGPDL YGPLWVSMTL IFVLAVTSNL SAYLHHWQKV KRADDATQVD
AFEFDIRHLV RASSVVMTMT VGVPTVLFLA CVCVGMSGIP WALWVCCYGY AQVPFLLAAA
VVWVWPHEIW EWSVLLAAMV VSGTLVLRNM STPLLSQDVS ASQSKAAPIA IAILACHVIY
AGVLKVSFYE
|
|---|
| |