Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44627 |
Symbol | |
ID | 7197630 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 1090335 |
End bp | 1092859 |
Gene Length | 2525 bp |
Protein Length | 652 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178640 |
Protein GI | 219115689 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGGTGA CAGGCACCCC AGCCTGCTCT GGGAAAATTG AACCTTTTAC CATCCAATCC GACATTTCTC GGGCATCCGG ATCTGCGGTC GGTGATGTTT CGGTCAACAA GAGAATGGGT GTTGCTCCTA TTCTTACAGT TGATCCGTTC CAACCTCTAC CCCGCAACCT CTCAACCCGT CCATTATGAC GATAGTCATC CAGACTACAA GCTGCCCTCC TCAATGGCGG AAGAGACGAA CCACGGTAGC CGCTAATGTG GTGTTTGTGC TACTCCTGGC GATGCAGAAA ACAAGAACGT GTGCTGCCTG GGCAGTCACG TCCACTGTTT CCTCGCTGGC GTACCCGTGC CACCAAACGG CAAGAGTTGT ATCGTCACCG CCGTCGTCAT CGTACAGATA CAGTCATCGT CGCGCAACTC CTTCGGAAGA TGGGGCTTCG GATACGACCT CCAGATCAGA CCTATCCGTT GCGAAAAAGA TGGTGATGAA AATCCAACAT ACTATTCACC CAATCGACCA TTGCAGGACT TCAAAAGCTA TGCGGTGACT AGTGCGGACG GCAACGCAAT CTCTGACAGC GATCAGAGTC TTGATTCATT GGAAGCGTTG TCATCGTCCG TCAACGAATA CTCTTTCTTC GACGAAGCCA TACTGTACGT TCGCGGTGGC AGCGGCGGAC AAGGTTCCAG CACCTACAAA AAAGCCGCAG GTGGACAGAA CGGACAGCCC GACGGAGGCA ACGGTGGTCA AGGCGGAAAC GTGATTCTTC AAGTAGACGT CTCACTCAAT ACATTGGCAG GACTCACACA AGCCTGGCGA CCAAATTCGT TCGGCGGTAG TGGTGCCGCG GCGGCTCCCC AATCCACGGC TACCTTGCGA CCCAAATCGT TTCGAGCCGA AAATGGCAGT GACGGCGACC GCCAATTTAA AAATGGTCGC TACGGAAAGG ATGTGTACAT CCGTGTACCA CCGGGTACTG TCGTTCAGGA AGAGATATCG CCCGGAGACT ATCGCGAACT AGGTAGCTTG ACCGAAGTAA CGGACGAACT TGTAGTAGCA CAGGGTGGGC AAGGGGGCGA AGGTACCGGT GTTCAGGGTC GCAACCGCGG GGTTCGGCGA CCACGGATAC CGGCGACTGG GGGCGACCGT AAAGTACTCA AGCTTACTCT GAAAATTGTC GCGGACGTGG CCCTTGTGGG AGTTCCCAAC GCGGGTAAAT CCACCTTTTT GGCCGCCGTG ACACGGGCCA AGCCCAAAAT TGCGAACTAT CCGTTCACCA CCGTCATTCC GAATCTTGGG GTATGGATTC CGGGTGGGGC GTTGGAAGAA GCACAGTCCT CACAGCCAGA TAAGGGTGCC GGTAGTGAAG GGCTTGTCTT GTGTGACGTG CCGGGCTTGA TTGCCGGGGC TGCGCAGGGT GTCGGGCTGG GACACGCGTT TTTGCGACAC GTCGAACGCT GTCACGTCAT TCTGCACTTG ATCGATGCGA CGTCCAACGA CCCAGCAGCT GACTACGAAA TGTTGAATCG TGAAATAGTC AAGTACGGAA CTGGTCAGCT TGCACAAATG CCTCAAGTTG TCGTTATCAA CAAGATAGAT GCCTTTGAAG GTGCCAAACA AGAATGGGAA GAAGGACTTG AAGTTAAATG GGCACGGAAT GATCTGGAAC GAAAGATGAA AGAGTCGATG CCGCATTCAA GGCTCATGTG GATGAGTGCG AGGGAACGTG AAGGTGTCGA CGATCTCATG TCTCGACTGG CTTCCTTTGT CAAAAAAGTC AAGGCTGGCG TACCGTAGAC ATTTGTGCTA CAGATGTACA AATCAATAAT CTACAGTGTC AAAGAGCCTT TTCAATCGCT GTCCGCTCAG ATGAGCGTTA CTCATGTCCC AGGCAAACAC GTGCCACACA TGCAAAATAT TTTGTATCAG CCAACACTCA TGGCTTGTTG GTCGAGCCGA CATATCCATT TCTATTTTAC GGGACATCAC CAATCCGTTT CGATCCCATC CGGAATGTTT TTGGACCGAC AGCTCGTCGG CGCCTCCAAC GGAAACCACG CGAGGGCTCC GGGCAGAGAA AAGCCTAGCC GTACCTGGAT TCGCCTGTGT ATCGAAGTAC TGGCTTCAGT GAACGCTTGG AGCACCGTGA CAATCCAACG TAATTTAAAA AGCGTCGGTT TGGAGGGTTG CCGTTCTTTA GAAACGGCGT CATTCCTCTC TCCGGAGTGC TGGGGTCAAG CTCCGCGTCT CTCTGGCTAG CTGAGACGGC AGTGCTTTCA TTCATAAAGG ATTTCCGCGA AGTATGTAGA TTTCCGTGTT CCGTTTCTAT GTGGCTTGAA GTGGAGCTCG TTGCGACACC GCCTTTCTCG TATCTCAGAA GTGCGGAATA TTTCAAATGA CGAGGTGCAA TTACAAGTCC AATGAGGCTA ATGAGGGCTT TCCACTTACC TTCGCCCGAC ATTCATTATG GTCTCATAGT CGGCGATCAA AAAGTAACAC CTATGATAAA GGTTTTACGC GACAC
|
Protein sequence | MLVTGTPACS GKIEPFTIQS DISRASGSAV GDVSVNKRMG VAPILTIQSS SRNSFGRWGF GYDLQIRPIR CEKDGDENPT YYSPNRPLQD FKSYAVTSAD GNAISDSDQS LDSLEALSSS VNEYSFFDEA ILYVRGGSGG QGSSTYKKAA GGQNGQPDGG NGGQGGNVIL QVDVSLNTLA GLTQAWRPNS FGGSGAAAAP QSTATLRPKS FRAENGSDGD RQFKNGRYGK DVYIRVPPGT VVQEEISPGD YRELGSLTEV TDELVVAQGG QGGEGTGVQG RNRGVRRPRI PATGGDRKVL KLTLKIVADV ALVGVPNAGK STFLAAVTRA KPKIANYPFT TVIPNLGVWI PGGALEEAQS SQPDKGAGSE GLVLCDVPGL IAGAAQGVGL GHAFLRHVER CHVILHLIDA TSNDPAADYE MLNREIVKYG TGQLAQMPQV VVINKIDAFE GAKQEWEEGL EVKWARNDLE RKMKESMPHS RLMWMSARER EGVDDLMSRL ASFVKKVKAG VPVKEPFQSL SAQMSVTHVP GKHVPHMQNI LYQPTLMACW SSRHIHFYFT GHHQSVSIPS GMFLDRQLVG ASNGNHARAP GREKPSRTWI RLCIEVLASV NAWSTVTIQR NLKSVGLEGC RSLETASFLS PECWGQAPRL SG
|
| |