Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44610 |
Symbol | HemD |
ID | 7198106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 1036862 |
End bp | 1037854 |
Gene Length | 993 bp |
Protein Length | 296 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | uroporphyrinogen-iii synthase |
Protein accession | XP_002178352 |
Protein GI | 219115113 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.20099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTCATGCGAG TCTTGCCAAA CTAATCGTTC AGCTTAAAGG AATCTACCAT TGGAAGGGTT ATCCTAGCGC GTTAGAGAAA TAGAAAATTG CTCTTGCCGA CAATGTGGCT TGTCGTCGTC TTGGTGGGAA TCGTCACGTC CACATCAAAT GCGTACGAGT TCTCGTTGCC GAGAATTCCT CGACGATCGA AATCTCTCTC GCCCCGACTC GCGATGACTA GTACCAGCTC TGCAGAAGAC AGTATTGCTG TTGCTGTGAC ACGCGAAGAC GGAAACAATA AGAAGCTGTT GAAAGCCTTG GAATCTCGAT TGGCCGGACG TATTTCAGTT CTTGAAGTGC CTTGTATTGC CCATGCTGAT GGGGAAGACT ATGCCTTGCT TGCTGAAAAA TTACGATCGG AGCGATGGGA TTATGTCGCC GTCACCTCTC CTCAAGCAGC TATTATTTTG AACAGTGCTT GGGATAGTGT ACGAGACGAC CCTATTCCAG TCACGGCCGT GGGAAAGGCC ACATCAGAGG CTTTAGAAGA GTACGGCATC GCCGTTTCCT TTTGCCCGTC CAAGGCTATT GCGACCACGC TCATGCTGGA GCTTCCTGCT ACTAGAGTAA CTGATGCGAC ACGAGTTCTA TATCCAGCGA GTGCCAAAGC GCGAACAACG TTGGAGAATG GTCTCAGGGA ACGAGGCTTT GAAGTTGTAC GTCTTAACGC GTATGACACA GTTTCGGCAC ATTGGACGCA TATACAAAGG ACAAATGCAG AGAAGTGTCA AGTTGCCTGC TTTGGGTCGC CGTCGGCAGT GGATGGTTGG CTGAGGAACT CCAACAACAA TACCACAGTT TTGGCTGCTT GTATAGGTAA AACGAGTGCT GACGTTTGTC GCGACAGAGG TTGGCCGAAA GAATGCATTT TCTTCCCAGA CAAGCCAGGT ATCGAAGGAT GGATCAATGT CGTAGAAGAA GCCGTTGACG CCCTAGTCAG CGAGACAGTA TAG
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Protein sequence | MWLVVVLVGI VTSTSNAYEF SLPRIPRRSK SLSPRLAMTS TSSAEDSIAV AVTREDGNNK KLLKALESRL AGRISVLEVP CIAHADGEDY ALLAEKLRSE RWDYVAVTSP QAAIILNSAW DSVRDDPIPV TAVGKATSEA LEEYGIAVSF CPSKAIATTL MLELPATRVT DATRVLYPAS AKARTTLENG LRERGFEVVR LNAYDTVSAH WTHIQRTNAE KCQVACFGSP SAVDGWLRNS NNNTTVLAAC IGKTSADVCR DRGWPKECIF FPDKPGIEGW INVVEEAVDA LVSETV
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