Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44603 |
Symbol | |
ID | 7198101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 1016703 |
End bp | 1017408 |
Gene Length | 706 bp |
Protein Length | 220 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178625 |
Protein GI | 219115659 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCCGT ATTCCATCGA TGTTACAGAA GCCAGCATGT TTTCCTTTGC TTCTAATGCA GTCCGAAATG GCCACTTGCA ACGAAGTTCG GCCCGTTGCT TTTCGGACGT CGCCCACAAG CCCTTGCTTA ACTTGCACGG CTTACAAGCG CGTTATGCTA ACGCTACATA CGTTGCTGCT TCCAAAGTGG GCGGACTTGA GACTGTTGAA AGGGAACTTA TGGGTCTCTA TAAATCCTCC CAGAAGTCCG CCGCCTTTGC GGCATTCCTT GAGAATCCTA TGATCAGCCG CGACGAAAAA ACTAAGTATG TTGCATCAAT GGACAAGTTG TCTCCCATTA CCCGCAATCT TCTAATTACC ATGGCTGGAA ACGCACGTTT GAATGAATTG CCTAAGGTGG CGACCACGTT TTCACAACTC ATGAAGGCTA AGCGCGGTGA GGTCGAAGCT CAGATTATCA GCGCATCGGA ACTGTCTGCT GCTGAACTAA AGGAAGTGAA AGCGGCGATG CAGTCCCAGG TGCCGAAAGG AAAAACTGTC ATTATCGAGG CAGTTACCGA CCCTTCTATC GTTGGAGGAT TGCAGGTACA AATTGGAGAC CAGTTTTTGG ATCTTTCGGT GAAGAGCCGA ATTGAAGAGA TTGCCCGTAC TCCCTTGAGC TAAAATATAA TAGCAATCTC GAGACAAACG TGTCTTTTAA TTCTTA
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Protein sequence | MIPYSIDVTE ASMFSFASNA VRNGHLQRSS ARCFSDVAHK PLLNLHGLQA RYANATYVAA SKVGGLETVE RELMGLYKSS QKSAAFAAFL ENPMISRDEK TKYVASMDKL SPITRNLLIT MAGNARLNEL PKVATTFSQL MKAKRGEVEA QIISASELSA AELKEVKAAM QSQVPKGKTV IIEAVTDPSI VGGLQVQIGD QFLDLSVKSR IEEIARTPLS
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