| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44453 |
|---|
| Symbol | |
|---|
| ID | 7197745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011672 |
|---|
| Strand | + |
|---|
| Start bp | 610416 |
|---|
| End bp | 612342 |
|---|
| Gene Length | 1927 bp |
|---|
| Protein Length | 589 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178263 |
|---|
| Protein GI | 219114935 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCCCCAAAAT CTGCATGTGA TTCGGTTAGT AGTTCATCTC ATACCAAAAT TTTCTCTTCG
ATTCGTGTTG CCTCGCTTTA GCTGTGGAAA GGCTTGTTCC GGGAGCACGA AGAGAGAAAC
ATTCAATATC GGATAATTTT CCGGTCTCGA GGGTGCAATG AAACAATCCC GCTCGTCCAG
ATCTCGCGTG GAAAAAACTG TTCCAAAACC ACCGCCTACT GGCCCAAAAA CTCCATCTAC
GCTGGCCGCC ACCGTGGCAG CAGGGAAATC TTTCGAGACC ACCGAGCGCT GCGGCACATG
TTCTGCATGT TTACGTGAAG ACTGTGGCCA GTGCGAAGGA TGCGTATGCA AACAAAAATA
CGGAGGTGAT GGCTCCAGTA AGAAGCAGTG CGTCTATCGG GGTTGCCAAG CTATTTCGGA
GATAAATCTA AAGGTCGGCG GTGGCTGCTT CGCGAGCGCC ACTCACAACA GCGACATCAG
TAGCGTTTTG TCTATATCGC AATACCCACC ATACCCCTTC ACACCGCCAC CGTCTTTAAT
CGACGTCAAC AAAAAGAGGA AACCTGATTT GACAATAGCT GACAAAAAGT CGATGTATGG
GAAGCTCATC CCAAGTGAAT CTCCACGCGA TCACTGTTCC GGCTGCAACT TACGGCAAGA
AACCATTAAC GATTCTGTGC TTATCTGTGA CGGTCCTGCT TGCGGTCGTG AATATCATCT
GCGTTGTTGC GTGCCTGCTC TTGACATCAT TCCGGAAGGC GATTGGCTCT GCCAAGACTG
CAGTCCGTCT GGCAGCGCTG AAACTTTGAT GCAATATCTT GAATCAAACG ATGAACGACG
TTGTGACTTT CAATCTTCTG AGGAATTTGT TGCCTCTCTC ATCTCACATG ACATGGTAAA
AGAAAAAGTG CACCGTCGCC CTCTGTCGGA ACTCGAACGA GCCACTGAAA TCCATCGTAG
TGCAATTGGC GAAAATTGGA ACCTTTTGAT TTCACCAGAC TTTTATGTCG GAAAGCCGTT
GCGTATTTAC GATGGACTAG CAAACCAGTA CCATTCGGGC CGTCTGGTAG ATTGTCGACA
GTCTCTCTCT TGTGGGACAG TAGAATACCT TGCGCGTTTC CCTTCCGGAA AGGATGGTCG
GAAATCTCCA CTCCACCACT GGATTATTCT CGAAGAACAT TGCCTTGCTA TTGGCACCGC
ACTGATCTGG TCACAAACTC TTGGTCGGCG TTGGAAACCT GCACAGCTCC TGCTTCGTAC
TGGAAGAGAA CTTGTCTCTG TCGCCAGTAT GTATTCGGAA GAACAAGGTG AGATTCGGTT
TACGGATTCC AAGCATACTT TGAATGCGTT GCCTAGCACA CCGGAAACAG ACACAACTAA
ACCTGCGGCC ACTCCATGCT CGGGAAGTGC CTCTCGATCA GCACCGTCTG AGCCAAGGTT
TCCTATCAAG AAGAGGCGAA GGAACGAAGT GTGGGGCCTT GTACGTTTCT TTGGGGAAGG
AACCTTTGAA TTCGTCCCTT TGACAGCTCG TGCTCGCAGT TATAAGGATC CAATCTTTCA
AGCAAAATAC GGAAAGTCGG AAGCAATATG GCTCCCGCTT GCGATCGCAG AGGCTGAGCA
GGCAGAGCAA ACATCTGTTC TTCAATGGCG TAACATGGAG CAAAACAATA GACTTAGCCA
ACATGTCTTA TCGAGCAGAG ATGACTACGG TCTTCAACCA CTACAACCAA CCAACTCGTT
CGATTCTGTT TCTTTTCCCT CGCAGCTTAC ACCATCAATT CCGCAAGGCT TAGATCGACT
TCATATATTG AATCTTTTAC AAGAGCAAGG GTTAGAAGTC GACAAAGACA TAGCGTCAAT
TCTTCAATGT ACGAGTGTGC CAGTCAACGT GGCTAGGTGC CTCAAACAAA ATGGTCATGT
AGTATAG
|
|---|
| Protein sequence | MKQSRSSRSR VEKTVPKPPP TGPKTPSTLA ATVAAGKSFE TTERCGTCSA CLREDCGQCE
GCVCKQKYGG DGSSKKQCVY RGCQAISEIN LKVGGGCFAS ATHNSDISSV LSISQYPPYP
FTPPPSLIDV NKKRKPDLTI ADKKSMYGKL IPSESPRDHC SGCNLRQETI NDSVLICDGP
ACGREYHLRC CVPALDIIPE GDWLCQDCSP SGSAETLMQY LESNDERRCD FQSSEEFVAS
LISHDMVKEK VHRRPLSELE RATEIHRSAI GENWNLLISP DFYVGKPLRI YDGLANQYHS
GRLVDCRQSL SCGTVEYLAR FPSGKDGRKS PLHHWIILEE HCLAIGTALI WSQTLGRRWK
PAQLLLRTGR ELVSVASMYS EEQGEIRFTD SKHTLNALPS TPETDTTKPA ATPCSGSASR
SAPSEPRFPI KKRRRNEVWG LVRFFGEGTF EFVPLTARAR SYKDPIFQAK YGKSEAIWLP
LAIAEAEQAE QTSVLQWRNM EQNNRLSQHV LSSRDDYGLQ PLQPTNSFDS VSFPSQLTPS
IPQGLDRLHI LNLLQEQGLE VDKDIASILQ CTSVPVNVAR CLKQNGHVV
|
|---|
| |