| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44434 |
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| Symbol | |
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| ID | 7197676 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | + |
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| Start bp | 539429 |
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| End bp | 540947 |
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| Gene Length | 1519 bp |
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| Protein Length | 430 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178248 |
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| Protein GI | 219114905 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.497983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACTCATGCG CCTCGCAGTA CTTTCTATGA ACTTGATATG TTACCATATC AGATATGGAC
GACATCAATG GGCGCTTGCC GCATCCTCCC GATGTTGACT TAGAAGCTGT CTCTCCCACT
ACGACCGAAA CAAAACGAAA AGCCTTGTCC CAGACCCCCC CTCTTTCCAA GAATTCCTCA
AATCCGCACT ATCAGCAGCT GGATTTACCG CGGTTGGTTA AGCGTGATCT CCCTTTCAAG
CAAAGTAAAA ACAAATTGCG CGTGGGTCAC GATCATGGTT GGAAAATATA TTGGCTTCTT
CGGTATGATT GGTTCCATGC GTTTCTACGA CTACCCACGA CATTTTCGCT GGTTTCACTG
TTGGCACTCT GGACGTCCAT GATCATTCTA TTCGCTGGTA TCTACGTTGG CGTCGATCGT
CAAAGTCCTG CTGTCTCATG CGGACTTGGT GACGCTAACG ATCCTATTAA GTTTGGAGCG
GCTTTTGCTT TTTCTCTAGA GACCTGCACA ACTGTAGGGT ATGGACTTCC ATCAGGCACT
AACGCATTCT TTGAAAACTG CCGGGGTCTA CAAATTGCAA TCTACTTTCA AATGGTATGG
TCAATGATGT TTAACGCATT CTTATTCGCT TTCTTTTACA CTCGATTGGG ACGAAGCGAA
TTGCGGGCAT CCCAGGTTCT CATGGCCGAC AAGGCAATCG TCTCCATTGT CGACGGCCAG
GTCCGGTTCC AGATCCGGAT GGTGGACATA GACGCCAAGC ATCCGGTTGT TGAAGCTCAT
GTGCGGCTGT ACGCTCTCTC TAAAAGAAGA CCTGTTCCGA GGCCACTTCG TATCATCGAA
CCGGATGACG ATCTAGGCGC CACGATTTTA TTATCGTTCC CAAGTGTGGT GAGCCACCAT
ATTGATCTCT ACAGTCGCTT GTACCCATGC AACCCAGAAT ACAAGGTTCC AGTGCGCTCT
CCTGGTTTAG TCTTGAGGCA AATCGATTCG TCTGCCACGA ACCGGGAAGA AGTTATTTGT
CCTATATGTG CTGGTAAGAA TTTGCCATCG TAAGAGAGAT AGTTTTGTGA GTACCTACCT
CCGTGACTTT AACATGATTC ATTTTCTTGT ATCATTGCAG AAGCTTATGG GACAATTGAA
AGGCTGCGAA CGCATATTCG TTACCAACAA ATTGTCGAGC AACAAGAGGA TTATCCCGTT
GATGGCACTC ACCTTTCACT TAGCGAAAAA TTCTTAAATG AGCTGATAGT ACCGACCCAC
AATCTCAGGG CACTAAAAGA TCATTTTGAA CAAGAAATTT CGGAAATCAT TTGCGTCGTT
GAGGGAATGT AAGCTGTCAG ATTCGTAAAA ACAGATAGGT TGTTGCACAA TATTTGTGGA
CTAACATTCT GACTTGCTTT CTCGATTTAT TCAGTGACCC ATTGATGTCA GGCACGTTCC
AGGCCCTCCA GTCATATCGC TTCGAAGATA TTGTTTGGAG CGAATCTGCG CGCTTCACTC
CGTGTCTGAA CATGAATGG
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| Protein sequence | MDDINGRLPH PPDVDLEAVS PTTTETKRKA LSQTPPLSKN SSNPHYQQLD LPRLVKRDLP
FKQSKNKLRV GHDHGWKIYW LLRYDWFHAF LRLPTTFSLV SLLALWTSMI ILFAGIYVGV
DRQSPAVSCG LGDANDPIKF GAAFAFSLET CTTVGYGLPS GTNAFFENCR GLQIAIYFQM
VWSMMFNAFL FAFFYTRLGR SELRASQVLM ADKAIVSIVD GQVRFQIRMV DIDAKHPVVE
AHVRLYALSK RRPVPRPLRI IEPDDDLGAT ILLSFPSVVS HHIDLYSRLY PCNPEYKVPV
RSPGLVLRQI DSSATNREEV ICPICAEAYG TIERLRTHIR YQQIVEQQED YPVDGTHLSL
SEKFLNELIV PTHNLRALKD HFEQEISEII CVVEGIDPLM SGTFQALQSY RFEDIVWSES
ARFTPCLNMN
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