Gene PHATRDRAFT_44427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44427 
Symbol 
ID7197669 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp518802 
End bp519985 
Gene Length1184 bp 
Protein Length311 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178528 
Protein GI219115465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGCACCGACG CATCCCGAAA GGGTCAACGA TGGCGCGATT TTTATAATCT TAGTGATCCT 
AAGGAAACGA CTCCGTCACC CCGAGCCTTT CGTTACTCGC AACCAGTAGA AGCATACAAG
AGATTTGACT GGCTCGCGTT TTATGCCGTC CGCCTTAGTG ACCGCATTTT CTCTCTTTTT
TCTTTGCAAC CTTGGCTGCA CTCCTCAAGC GATGACGAGT AGCCTTAGAC TTCGGGTCGT
GTCGTACAAT TTGCTTTCAT CACACGTGAG TCTGCTTCGT CTTCATTTCT CACCAGGTTT
TGTCCAGTAC CGAGTATTCT ATTGATACTA GACTCACGCT GATACTCATC CGCGCGTTTT
TATCACTCCG TAGCTTGCTA CAACAACCCA GTATCCGACC CTGAATCCAG AACACTTGGA
TGCGAAAAAT CGCCTTCCGC TTGTCTTGAA TAAGCTGGAA AAAGAGATAC AGTCCAATCA
AAATGTAATA CTCTGTTTGC AAGAGGTCTC GTACGACTGG GCCGGATCTT TGCATACCTT
CTTGGCCAAT AGAGGATACC ATCTCGTTAC CGGATCGTAC GGTAAGAAGT TCAACGGATA
CATGGGGGTT TGTTTAGCTT GGCCGCAAGA TTCCTTTGTT GTCGAAGATG TAGATATTTC
ACGAATTGCC GATAAGCGTG AAGGTGGATG GCCGGTCAAC GAAGAGCCGC CATTGCTTCA
GAAGGTATGG TCCAAGCTGC AAACCGCGCT CGACAAGCCA TTGCGAAAGC TGGGTCTCGT
TTCGGGTGAA GATATTGATC ATTGGGACAT GTCGGAACGT CGCTTTAACG TGCTCGTGTC
CGCCACTCTC AAAGAGAAAG CTTCCGGACA ATCCTTCTGC ATTGGCACGT ACCACATGCC
GTGTGCCTTT TATGCTCCCA TGGTCATGAC GATACATACC GATCTGGCAG CACGCCACGT
GCAGCGACTT GCGGAATCAC ACGGATCAAT TCCGTACATA TTGGCGGGAG ATTTCAACTT
CAAACCGTCC GATCCCTGCT ATCGACTGCT CACTACGGGG GAAATTGATA GCACGGATCC
CTATCATCCG TCGCCGAAGG GTGGGGTCGA GTGGAAACCT TCTTCCATCA ATATGGCGAG
CGCTTACGCG GTGTCGGACC ATGGAGAGCC GGACTTTACA AACT
 
Protein sequence
MPSALVTAFS LFFLCNLGCT PQAMTSSLRL RVVSYNLLSS HLATTTQYPT LNPEHLDAKN 
RLPLVLNKLE KEIQSNQNVI LCLQEVSYDW AGSLHTFLAN RGYHLVTGSY GKKFNGYMGV
CLAWPQDSFV VEDVDISRIA DKREGGWPVN EEPPLLQKVW SKLQTALDKP LRKLGLVSGE
DIDHWDMSER RFNVLVSATL KEKASGQSFC IGTYHMPCAF YAPMVMTIHT DLAARHVQRL
AESHGSIPYI LAGDFNFKPS DPCYRLLTTG EIDSTDPYHP SPKGGVEWKP SSINMASAYA
VSDHGEPDFT N