Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44427 |
Symbol | |
ID | 7197669 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 518802 |
End bp | 519985 |
Gene Length | 1184 bp |
Protein Length | 311 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178528 |
Protein GI | 219115465 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGCACCGACG CATCCCGAAA GGGTCAACGA TGGCGCGATT TTTATAATCT TAGTGATCCT AAGGAAACGA CTCCGTCACC CCGAGCCTTT CGTTACTCGC AACCAGTAGA AGCATACAAG AGATTTGACT GGCTCGCGTT TTATGCCGTC CGCCTTAGTG ACCGCATTTT CTCTCTTTTT TCTTTGCAAC CTTGGCTGCA CTCCTCAAGC GATGACGAGT AGCCTTAGAC TTCGGGTCGT GTCGTACAAT TTGCTTTCAT CACACGTGAG TCTGCTTCGT CTTCATTTCT CACCAGGTTT TGTCCAGTAC CGAGTATTCT ATTGATACTA GACTCACGCT GATACTCATC CGCGCGTTTT TATCACTCCG TAGCTTGCTA CAACAACCCA GTATCCGACC CTGAATCCAG AACACTTGGA TGCGAAAAAT CGCCTTCCGC TTGTCTTGAA TAAGCTGGAA AAAGAGATAC AGTCCAATCA AAATGTAATA CTCTGTTTGC AAGAGGTCTC GTACGACTGG GCCGGATCTT TGCATACCTT CTTGGCCAAT AGAGGATACC ATCTCGTTAC CGGATCGTAC GGTAAGAAGT TCAACGGATA CATGGGGGTT TGTTTAGCTT GGCCGCAAGA TTCCTTTGTT GTCGAAGATG TAGATATTTC ACGAATTGCC GATAAGCGTG AAGGTGGATG GCCGGTCAAC GAAGAGCCGC CATTGCTTCA GAAGGTATGG TCCAAGCTGC AAACCGCGCT CGACAAGCCA TTGCGAAAGC TGGGTCTCGT TTCGGGTGAA GATATTGATC ATTGGGACAT GTCGGAACGT CGCTTTAACG TGCTCGTGTC CGCCACTCTC AAAGAGAAAG CTTCCGGACA ATCCTTCTGC ATTGGCACGT ACCACATGCC GTGTGCCTTT TATGCTCCCA TGGTCATGAC GATACATACC GATCTGGCAG CACGCCACGT GCAGCGACTT GCGGAATCAC ACGGATCAAT TCCGTACATA TTGGCGGGAG ATTTCAACTT CAAACCGTCC GATCCCTGCT ATCGACTGCT CACTACGGGG GAAATTGATA GCACGGATCC CTATCATCCG TCGCCGAAGG GTGGGGTCGA GTGGAAACCT TCTTCCATCA ATATGGCGAG CGCTTACGCG GTGTCGGACC ATGGAGAGCC GGACTTTACA AACT
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Protein sequence | MPSALVTAFS LFFLCNLGCT PQAMTSSLRL RVVSYNLLSS HLATTTQYPT LNPEHLDAKN RLPLVLNKLE KEIQSNQNVI LCLQEVSYDW AGSLHTFLAN RGYHLVTGSY GKKFNGYMGV CLAWPQDSFV VEDVDISRIA DKREGGWPVN EEPPLLQKVW SKLQTALDKP LRKLGLVSGE DIDHWDMSER RFNVLVSATL KEKASGQSFC IGTYHMPCAF YAPMVMTIHT DLAARHVQRL AESHGSIPYI LAGDFNFKPS DPCYRLLTTG EIDSTDPYHP SPKGGVEWKP SSINMASAYA VSDHGEPDFT N
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