Gene PHATRDRAFT_44420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44420 
Symbol 
ID7197878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp497308 
End bp498378 
Gene Length1071 bp 
Protein Length293 aa 
Translation table 
GC content56% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178524 
Protein GI219115457 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0456512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TACGCTGTCT TTCAAGTCAG TTCAAGGGTA AAGCAGACAG CCCTCTGCGC CTGAGCAGTT 
TTCAAAAACC AACATCCGTC GCATAAAAAG CTAGCTTTGC ACTACTGCAA GTCACTCTAC
TTTGACTTAA AACAGATTCA AGCCTACAGT GTATTCGACA AGAAACTTAC GATGGTCTTC
GGTAAGCTAT TCTCTTCGTT CGCAATTTGC ACCTCGGTGT TGTCGTTGTT GGTTTTCTCG
CCGAATCAGC AGCTCTCGCT CGTTTCCGCC CTTCCCACCG GCGCCGGTGG TTGTGCCCGC
GATGACGCCG GCTCCACGAA TACTGGTGCG CACAATTTTC GTCCCGTTAC GACAGGACTA
CTCTCCGACA AGGGACTCCA AGTCTTCATT AGTCCGTCTG CCACCGATCC GTTGGCAGAT
GGTTCCATCG AATTGGAACA AGACGGGAGC CCTACTCTCC AACTTGGTGT TAGATACTGG
GTGCATCTGG TCCAACCGAA CGGTGTCGAA GAGGGCTTCC GCGGCTTTTT GTTCCGTCTC
GAAAGCCAGA ACGGTGTTGA CACCACGGCC GCCTTGTCCG CCCCCGACAC TGACCCGGAT
GCCCGTTTAG CCGCCGAGAC CTGCATTAGT GTGAATAATG TCGGTGGCGT CACGCATAAG
GCGCGGGAGT TCGACCAAGA TCCCCTGACG GAGGCCGTCG CGTTGCTCGT CTTGGACGAA
GCCGATGAAG ATATGTTCTT CGACGTAACC GCCGTCATTT GGAATCGCGA ACTAGCCGAT
GGAACACCCA CTTCGGAATA CTACTATACG CCCTATCTCT TGACGGCTGC CGAAGCCGCG
CCCGGTGAGG CGGAGGCTAC TCCCACTACT GCTCCCGGTG AGGCGGAGGC TACTCCCACT
GCTGCTCCCG GCGAGGTGGA GGCTACTCCC ACTGCTGCTC CCGTCATGGG AGAGCCCGCT
CCCACTGCTT CTGGAACCCA GGCAGTCTCG GCAACTGTGG TCAACCTTGT CGCAGGTTTC
GCTCTCTCTC TCCTTGCTGC CTTTGCCTTG TAGTGAGATA TTGGAAAGAC G
 
Protein sequence
MVFGKLFSSF AICTSVLSLL VFSPNQQLSL VSALPTGAGG CARDDAGSTN TGAHNFRPVT 
TGLLSDKGLQ VFISPSATDP LADGSIELEQ DGSPTLQLGV RYWVHLVQPN GVEEGFRGFL
FRLESQNGVD TTAALSAPDT DPDARLAAET CISVNNVGGV THKAREFDQD PLTEAVALLV
LDEADEDMFF DVTAVIWNRE LADGTPTSEY YYTPYLLTAA EAAPGEAEAT PTTAPGEAEA
TPTAAPGEVE ATPTAAPVMG EPAPTASGTQ AVSATVVNLV AGFALSLLAA FAL