Gene PHATRDRAFT_44417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44417 
Symbol 
ID7197663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp488854 
End bp490755 
Gene Length1902 bp 
Protein Length584 aa 
Translation table 
GC content57% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178522 
Protein GI219115453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.101127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GACCATGTCG GAACCAACAA AGGAACGATA CTTGGAGAGT TGAGCGTGCA TGCTGTCTTT 
CTCTCGGCTT GGTAATTCCC GCAATTGCAC GTGTTGACGG TAAATAGCAA TCTAGCAAAC
TCTCGCCGCA AGGCATATGC TAAGCGAATG CTCGTGAACC TTACAAACCG CGCAATGGCG
CTGCTACTGG CTGGAATGCT CCTGATGAGC AATGGCGACA TTCCCGGATG CTCCAGTGTT
ACCGCGTTGG CTTTGTCGCA GTCATCCGTC TCCGCGGTAC ATCGCCGTAA CGTGGTGGTC
GTCGGAGGCG GTCCCGTCGG ACTCGCAACC GCACTGACTT TATCCCGTCC CCCTCATTCC
TGTAACGTCA CTGTACTAGA ACGGACCGAC GGTGACACGT CCGTGGCCAC CTACAATCCG
GCACGGTCCT ACTTGTACAA CATCAATCCC CGAGGGTTAC GCTGGGTCGA TTCCGTACCC
GAGGTGGCCA CAAAATTGGA CGACCGCGGT GTGGTTGTGC GGGGAGGATT CGGTCGGTTC
TGCATCGTGC CTGCCGATCC CTCCGTTGCT ATTCCGGAAC CCACAGGCGT GACCGTTGCC
GGCTCCCCAC CCAAGTCCCA GAAGCGCAAC ACCAGGGCCA CGCCATCAAT AAGCAAGTCA
GTTTGGATAC CTCGCCACCA AATGGTGGAG CTCCTCCAAG AATGCTGTGA GGAACAACTA
TACAATGATT CCAAAGGAGT CGGTTCTATT CAAGTGTGCA TGGGCAAAGA GGTTGCGTCT
ATGGTGGACA CCGCGGAGAC TGCACTACCG GAATCCCAAA AAGGACCGTC CATTACGGTG
CATTGTCGGG ACGGAAGTAT GTATGGAGCC GATCTCGTCG TGGCGGCGGA CGGCATTGAC
AGCGCGGTAC GTGCCCAATT GCGCGACCCG GCCCAGTCCG AGTCCTGGCT CGCATCCAAG
GCCCGTTCCT TTGTCGTCCG GCGCTACCGC TCGCCCGCCA CGGGTCTAAA ACTCAAAGCC
TTGCAACTTC CGCCCAATTT TACCATGATC GATCACGACG GGACCTTGGT GACGACACAG
GCACAGAACT TGTACAGTAT TCGCGGTACC AACCAAGGGA CCCGCGACTT TGCCTCGCTC
GGACTACTCC CCATGAAAGA TCCCGATATG GTGCGGCCGG CCAACATTAT TACTCGGCCC
GATCACGAAC TCTGGAAGCT GGCCGATGGT TCGGCGGTCA AGGCGTGGTT CCAATCGAAC
TGGCCGCGTT TGAATTGGGA CGAAATGGTG GACGACAAGG AATGGGAGCG ATTCGTTCAA
GCCAAAACGA CGACCTTTCC GTATTGCCAA TACGTGCCGG GATCGGTCGT TGTCGCTCCC
AACGAATCCG CGGGTGTCGT CCTGGTTGGG GATGCCTGTC ACGCGTTTCC ACCCGATATT
GGTCAAGGAA TTAACGCGGG TTTACAGGAT GTCGTCGCCT TGGACCTCGC CTTGCAAGAT
CGGGAAATCG ATTTGTGTCA AGATAGCGTA CCCCCGTCTT GGTCACCGTC GGCATCCGCT
CCGACGCTGG GACAAGGTCT TTTGCGCTAC CAACGCAATC GTCGAGCGGA ACACGGTGCG
TTGATTCGAC TGGCTCGATT CGGATCGCCC TACCAGTATC GACAGCCTTG GATTCGCGAT
CGGATTGGAC GTGTTTGTTG GAGTGCGAAC GTGGCCTTTC GTTTGCTCCT GAATAAGGCT
ACTTTTGGTT GGGTACCCCC GGCAGCCATT CTGCTGGCAC AAAATGTCAA TCTATCGTAC
CGGCAGGTAA TGCGGAGAGC GGATACCACC GCTCGTGTAT TGCAATCGAC CGTGCTTGCC
GCGGTGGCTT GGCTGCTGGT TCGAAAATTC TCGTTGCTGT AG
 
Protein sequence
MLVNLTNRAM ALLLAGMLLM SNGDIPGCSS VTALALSQSS VSAVHRRNVV VVGGGPVGLA 
TALTLSRPPH SCNVTVLERT DGDTSVATYN PARSYLYNIN PRGLRWVDSV PEVATKLDDR
GVVVRGGFGR FCIVPADPSV AIPEPTGVTV AGSPPKSQKR NTRATPSISK SVWIPRHQMV
ELLQECCEEQ LYNDSKGVGS IQVCMGKEVA SMVDTAETAL PESQKGPSIT VHCRDGSMYG
ADLVVAADGI DSAVRAQLRD PAQSESWLAS KARSFVVRRY RSPATGLKLK ALQLPPNFTM
IDHDGTLVTT QAQNLYSIRG TNQGTRDFAS LGLLPMKDPD MVRPANIITR PDHELWKLAD
GSAVKAWFQS NWPRLNWDEM VDDKEWERFV QAKTTTFPYC QYVPGSVVVA PNESAGVVLV
GDACHAFPPD IGQGINAGLQ DVVALDLALQ DREIDLCQDS VPPSWSPSAS APTLGQGLLR
YQRNRRAEHG ALIRLARFGS PYQYRQPWIR DRIGRVCWSA NVAFRLLLNK ATFGWVPPAA
ILLAQNVNLS YRQVMRRADT TARVLQSTVL AAVAWLLVRK FSLL