| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44417 |
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| Symbol | |
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| ID | 7197663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 488854 |
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| End bp | 490755 |
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| Gene Length | 1902 bp |
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| Protein Length | 584 aa |
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| Translation table | |
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| GC content | 57% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178522 |
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| Protein GI | 219115453 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.101127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GACCATGTCG GAACCAACAA AGGAACGATA CTTGGAGAGT TGAGCGTGCA TGCTGTCTTT
CTCTCGGCTT GGTAATTCCC GCAATTGCAC GTGTTGACGG TAAATAGCAA TCTAGCAAAC
TCTCGCCGCA AGGCATATGC TAAGCGAATG CTCGTGAACC TTACAAACCG CGCAATGGCG
CTGCTACTGG CTGGAATGCT CCTGATGAGC AATGGCGACA TTCCCGGATG CTCCAGTGTT
ACCGCGTTGG CTTTGTCGCA GTCATCCGTC TCCGCGGTAC ATCGCCGTAA CGTGGTGGTC
GTCGGAGGCG GTCCCGTCGG ACTCGCAACC GCACTGACTT TATCCCGTCC CCCTCATTCC
TGTAACGTCA CTGTACTAGA ACGGACCGAC GGTGACACGT CCGTGGCCAC CTACAATCCG
GCACGGTCCT ACTTGTACAA CATCAATCCC CGAGGGTTAC GCTGGGTCGA TTCCGTACCC
GAGGTGGCCA CAAAATTGGA CGACCGCGGT GTGGTTGTGC GGGGAGGATT CGGTCGGTTC
TGCATCGTGC CTGCCGATCC CTCCGTTGCT ATTCCGGAAC CCACAGGCGT GACCGTTGCC
GGCTCCCCAC CCAAGTCCCA GAAGCGCAAC ACCAGGGCCA CGCCATCAAT AAGCAAGTCA
GTTTGGATAC CTCGCCACCA AATGGTGGAG CTCCTCCAAG AATGCTGTGA GGAACAACTA
TACAATGATT CCAAAGGAGT CGGTTCTATT CAAGTGTGCA TGGGCAAAGA GGTTGCGTCT
ATGGTGGACA CCGCGGAGAC TGCACTACCG GAATCCCAAA AAGGACCGTC CATTACGGTG
CATTGTCGGG ACGGAAGTAT GTATGGAGCC GATCTCGTCG TGGCGGCGGA CGGCATTGAC
AGCGCGGTAC GTGCCCAATT GCGCGACCCG GCCCAGTCCG AGTCCTGGCT CGCATCCAAG
GCCCGTTCCT TTGTCGTCCG GCGCTACCGC TCGCCCGCCA CGGGTCTAAA ACTCAAAGCC
TTGCAACTTC CGCCCAATTT TACCATGATC GATCACGACG GGACCTTGGT GACGACACAG
GCACAGAACT TGTACAGTAT TCGCGGTACC AACCAAGGGA CCCGCGACTT TGCCTCGCTC
GGACTACTCC CCATGAAAGA TCCCGATATG GTGCGGCCGG CCAACATTAT TACTCGGCCC
GATCACGAAC TCTGGAAGCT GGCCGATGGT TCGGCGGTCA AGGCGTGGTT CCAATCGAAC
TGGCCGCGTT TGAATTGGGA CGAAATGGTG GACGACAAGG AATGGGAGCG ATTCGTTCAA
GCCAAAACGA CGACCTTTCC GTATTGCCAA TACGTGCCGG GATCGGTCGT TGTCGCTCCC
AACGAATCCG CGGGTGTCGT CCTGGTTGGG GATGCCTGTC ACGCGTTTCC ACCCGATATT
GGTCAAGGAA TTAACGCGGG TTTACAGGAT GTCGTCGCCT TGGACCTCGC CTTGCAAGAT
CGGGAAATCG ATTTGTGTCA AGATAGCGTA CCCCCGTCTT GGTCACCGTC GGCATCCGCT
CCGACGCTGG GACAAGGTCT TTTGCGCTAC CAACGCAATC GTCGAGCGGA ACACGGTGCG
TTGATTCGAC TGGCTCGATT CGGATCGCCC TACCAGTATC GACAGCCTTG GATTCGCGAT
CGGATTGGAC GTGTTTGTTG GAGTGCGAAC GTGGCCTTTC GTTTGCTCCT GAATAAGGCT
ACTTTTGGTT GGGTACCCCC GGCAGCCATT CTGCTGGCAC AAAATGTCAA TCTATCGTAC
CGGCAGGTAA TGCGGAGAGC GGATACCACC GCTCGTGTAT TGCAATCGAC CGTGCTTGCC
GCGGTGGCTT GGCTGCTGGT TCGAAAATTC TCGTTGCTGT AG
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| Protein sequence | MLVNLTNRAM ALLLAGMLLM SNGDIPGCSS VTALALSQSS VSAVHRRNVV VVGGGPVGLA
TALTLSRPPH SCNVTVLERT DGDTSVATYN PARSYLYNIN PRGLRWVDSV PEVATKLDDR
GVVVRGGFGR FCIVPADPSV AIPEPTGVTV AGSPPKSQKR NTRATPSISK SVWIPRHQMV
ELLQECCEEQ LYNDSKGVGS IQVCMGKEVA SMVDTAETAL PESQKGPSIT VHCRDGSMYG
ADLVVAADGI DSAVRAQLRD PAQSESWLAS KARSFVVRRY RSPATGLKLK ALQLPPNFTM
IDHDGTLVTT QAQNLYSIRG TNQGTRDFAS LGLLPMKDPD MVRPANIITR PDHELWKLAD
GSAVKAWFQS NWPRLNWDEM VDDKEWERFV QAKTTTFPYC QYVPGSVVVA PNESAGVVLV
GDACHAFPPD IGQGINAGLQ DVVALDLALQ DREIDLCQDS VPPSWSPSAS APTLGQGLLR
YQRNRRAEHG ALIRLARFGS PYQYRQPWIR DRIGRVCWSA NVAFRLLLNK ATFGWVPPAA
ILLAQNVNLS YRQVMRRADT TARVLQSTVL AAVAWLLVRK FSLL
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