Gene PHATRDRAFT_44390 details

Gene Information

• Locus tag: PHATRDRAFT_44390
• ID: 7197856
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: +
• Start bp: 405594
• End bp: 407668
• Gene Length: 2075 bp
• Protein Length: 627 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002178221
• Protein GI: 219114851

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.68947
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCCGTGGCAA CCAGCACAAT GGCGGCGACT CGACTGACTG GCATTTACCG ACGTTCAGTG 
ATTGCTTTGC TTCCAGCTCA TCCGTCGTGT AACATTCGTG GCAGGAATTG TATCTATGCT 
GGTCTCCGCG TGTTGCTTCT CGTATCTTGA CTAGAGCCAT TGACGACGCT CACAGTCAGT 
GCGATACTAC AATGCGACGA CAGTCGCTTG TCGTGGGTGT CGTCGTTGCG CTGCAACCCA 
ATCCAATCTT GGCCTTTTCT ACCAGCAGAT CGCCGACTCT GAAGCGTGAA CACCCGCGTT 
GGGTCAATAA CCAGAAACGA CCCCCGTCAG TTTTGTCCGC CGTCTCGCCG ATAGATACCT 
TGGTGGATTC CTGGAAGGCA CTTTGGGAAA AGCCAACGGC CGCCGTTTCC TTGCCCAAGA 
AACACCCGGC ACAGACAGTG CAAAATTTTA TTAGCGCCTA CAATGAAAGA GATTACAACA 
CGCTCGAGAA TATGGTCGAC CCAGACATTG AATTTGACGA CACGGCTTAC CCAAAACCGT 
GTCGAGGGCT GCCCGAACTT GAGCGTCGGT GGCGCTTGAC CCGGAATGCT CAAGGAGACA 
AGCGCATACA AGTCGCGGTC GATGACATTG CCTCTTCTAC GACCACTGTA GGTATTCGTT 
TTCATTTGGA AAATGTCGAA GGCGAGATTC CCAACGGTCG GGGAGCTGCC TTTTTCCAAC 
TTTCCAACGA CGGTCTACTG GTTAAAAAGG TGTTTTGGGT ACAAGAATCG GCTCAGAAAG 
GGGGAGAGGC CAGTCTGCAA ACCCTCAATC GCGCCAGCAA AGTTATGAAA TTGACTGGCT 
ATAACAAGGC CACCGCCACA TCTACCGCCA CGAAGGAGGC GTCCGAAATG ATCGAAACCT 
CATTCTTGTC TCTACCAGAG AAGTATTTTG CGGCTTGGAA TCGTCGAGAC ATGAGCAGTG 
CGGTTGCCTT GTTTGCGGAT ACCGTCACGT ATGATGATAC GGCCTTTCCG GAACCATTTA 
GCGGCAAAAC AAATTTATCA TCGCATCTTT ATAAATGCTC CAACGCGTTC CCTTCCACTT 
TTACCTTTCA AGTCGACAAG GTGGCCGACG CTGGAGACCG GATCTCTGTG TTATGGCACG 
TAGAAAACGA CGGGGATGAT TTACCTTTTA CGAGGGGATG CTCCTTTTAC AACGTTGATA 
CTAAACGAAA CGAAATACTG GACGGCATTG ATTTTGTTGA ACCCGGGCCG ATTAAACTCG 
GAGGATTCCG TTTGCTGGTG TCGACGGTCA GAACTAACCT TGAACGTGAA CCGGCTCGAT 
ACGTACCACT GATATCCTGG ATTGCCTACA TCTATATTGT ATTCTTCTCA AACGGGATCC 
TGCCGGGTGC GAATGCGCTA GAGCTTGAAC AACGAACTTG GGAAGAGGTT CGTGATTTGT 
CGCTCAACTT TTTCCTCGTT TCACCACTTC TCCAATTATC CTTCTCTCCA ACGGTGCATC 
CTATGCTAGA AGGCGTTTTC AATTTGCTCC TGTCTTGGGC GGCCATGTTT GCCGGTTTCT 
TGAGCGACGA CCGTCGAGAG AAGCCCAATG TCGCCCCAAT GCTTCCAATC GTCATCGGTA 
TGCAGTTTCT GACATCGGCG TTTCTAATGC CATATCTAGT GCTCCGGTCG ACCGAAGAAA 
GCACACTCGT GGCAAAGGAC GCCCTTCCGA AAGTGGCTCA ATTGGCAGAG GCGCGGGCGC 
TGGCGCCCTT CTTGGCGTCG GTAGGAACTG GTTCCATCGT ATGGGGACTA GTAGGACGAA 
TGGCAGATTT TGGGGACTTG TCGACTCGCT GGTCCAGTTT TATCGATCTG CTGAGTATTG 
ACCGCGTAGG CTCGAGCTTT GTCGTTGATC TAGCATTGTT TTGGCTTTTT CAATCATTTT 
TGATTGACGA TGACCTTAAG CGGAGGGGCA TAGATCCAGA AACTAGCGAA CTTCCGGTCT 
TTCTGGGAAA GTATGTTCCG TTCTTTGGCA TGGCACTCTA CCTTGCGATG CGACCACCAC 
TTCCTCTGAA TATACAGAAC TCGCAAAATG ACTAG 

 

Protein sequence

MRRQSLVVGV VVALQPNPIL AFSTSRSPTL KREHPRWVNN QKRPPSVLSA VSPIDTLVDS 
WKALWEKPTA AVSLPKKHPA QTVQNFISAY NERDYNTLEN MVDPDIEFDD TAYPKPCRGL 
PELERRWRLT RNAQGDKRIQ VAVDDIASST TTVGIRFHLE NVEGEIPNGR GAAFFQLSND 
GLLVKKVFWV QESAQKGGEA SLQTLNRASK VMKLTGYNKA TATSTATKEA SEMIETSFLS 
LPEKYFAAWN RRDMSSAVAL FADTVTYDDT AFPEPFSGKT NLSSHLYKCS NAFPSTFTFQ 
VDKVADAGDR ISVLWHVEND GDDLPFTRGC SFYNVDTKRN EILDGIDFVE PGPIKLGGFR 
LLVSTVRTNL EREPARYVPL ISWIAYIYIV FFSNGILPGA NALELEQRTW EEVRDLSLNF 
FLVSPLLQLS FSPTVHPMLE GVFNLLLSWA AMFAGFLSDD RREKPNVAPM LPIVIGMQFL 
TSAFLMPYLV LRSTEESTLV AKDALPKVAQ LAEARALAPF LASVGTGSIV WGLVGRMADF 
GDLSTRWSSF IDLLSIDRVG SSFVVDLALF WLFQSFLIDD DLKRRGIDPE TSELPVFLGK 
YVPFFGMALY LAMRPPLPLN IQNSQND