Gene PHATRDRAFT_44374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44374 
Symbol 
ID7198050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp371663 
End bp372426 
Gene Length764 bp 
Protein Length230 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178491 
Protein GI219115391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGAATCTTCG GAAAAATTCA TCCATCGAGA CATGTTTGTC GGTATTTGGA CTTTGCGCTT 
TCATTTTCTC TGTCGCCGAC GGCTTTGCTC CTGGATATTT CCATCGGCTA CCAGCCGCAA
CTCTTTCGCA CCTACTTTCT TACGACCTTC ACAGGGCGGC GATAGTACAC GGTCTTCAGG
CAAACGGCCT TACATTGCTT CCTTACAGGT AGTCGCAGAT GCCGAAGACA TTGACAAGGA
TCGCGGAAAA AGGAAGCATG ACGAGGAAGA GACGGTATCC TCGTCGTGGA TCGAGACAGG
GACGGGGGGC TTCTTGCCCA ACTTCGGAAG CCGTAAGATA AGCGAGGTCG CTACGATCGA
GGACTACAAG AAGGTTGTGG TTGAAGAACC CGATCTTTTG GTCTGTGTAC GCTTCTTCGC
CCCGTGGTGT CGTGCCTGCA AAGCCGTTTC GAGTCGGTTT CAGCGGCTAG CGAATGAATA
CCCGAAGGTC AAGTTCGTCG AATGTCCGTT AACTAAAGAG AATGCATACC TTCATCAAGG
TTTGGGTGTA CCGAGTCTAC CGTATGCGCA CATATACCAT CCAACAGCGG GATTGGTGGA
GGAGCGGAAA ATAAACAAGA ACGTTTTCGC GGAATTCAAG AATAAAGTTC TCAAGAGTTA
TCTCGACGGT AGTTGTCCGA TAGAATATGA TGACGAGAAA GATGGGAAGG AGTCTCTCCA
ATAGATTTAT AAGTCAAACG TATTAATACC TATCCGTATC CATC
 
Protein sequence
MFVGIWTLRF HFLCRRRLCS WIFPSATSRN SFAPTFLRPS QGGDSTRSSG KRPYIASLQV 
VADAEDIDKD RGKRKHDEEE TVSSSWIETG TGGFLPNFGS RKISEVATIE DYKKVVVEEP
DLLVCVRFFA PWCRACKAVS SRFQRLANEY PKVKFVECPL TKENAYLHQG LGVPSLPYAH
IYHPTAGLVE ERKINKNVFA EFKNKVLKSY LDGSCPIEYD DEKDGKESLQ