| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44339 |
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| Symbol | |
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| ID | 7197819 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 270131 |
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| End bp | 272014 |
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| Gene Length | 1884 bp |
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| Protein Length | 580 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178465 |
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| Protein GI | 219115339 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGATTC CGGATTCCAG TCATTGAGTA CCGGTTCTCG AGTGGCCGAG TGGTGGTGAC
CCAACAACCC ACGAGTCACT TGGCAAAGAC ACGATCGCTC GATGCTCTGC ACCCATCCGG
AGTCTCCGAA ACGTTCAAGA ATGTCTCATC GCCAAACACA CTTAATCGTT TTAATCCAAA
TTTTTATAAA ATTGGAGCAT TCGGAACGAC GTGGCTACAC AGTCAAACGG ACACCTGGCT
CGCTTTTCTT ACGTTGTTTG GTTGGCTGGC CCGTACCACA AACGCACTTC CTCGTGGATT
TTTGTATGTG CGTATGAGTG TCGGTACGTT TGTGCCCGTC CTAATAGGTA GCCAACATTC
GAAACGCAAG CGGGAAAGCA AGTACGCATA TCTACCATAT CTACCTACCT ATGTTGGTCG
GTGACACTTA CAGGTACCGA AACCTTTGTC CCCCCTTCTC CCCCGCCTGT CTTCTACGGA
CCCGACCTAC ACGGAACGCA AAAACGAAAT TTACATTTTT ACACACACTT ATCTCAGTCA
CTCACTCCCC ACAACCAAAA GGAGGGGGAC CGGGACATGG CTCGCCGCGA GTCCAAAGCA
CACAAGGTAC CTTTGCGCAC GTCGACGAAC GAGTGGGACG AGTACAGTAG TGTCCCCGTG
TACCACCACC ATCAACGCAA CGGTCCCTTT TGGTTCACCA ATCGTACCCA AAGTTTCGAT
TCCGACAGCC ACAGTATGGC AGTTCTAGCA ATGGAAAACC CGCAAGACCC CGTGGGCGAG
CAGCTCCTGG TGCAGCGTTC CAAGCAGCGC TTTCGTTGGC GGACGGCGGC CAGTAATGAA
AGTAGGCACG ATCCCATGGA TTCTTATCCC ACCAGACGCA AGCCCTCTCG GATGTTACTG
TATCTACGCA ATCGGGCCAA CGCTTCCAAC GTGACGGTTG TAGGCCTCGG AGTGTTGCTA
GCCATTCTCT CCGTTCACCG GGTTTTCTCT CTGTATATGA CTCACCGACG ATGGATCAAT
GCCCCCATTA CGTACATGAA CCGACAATGC CCCGCTCCGT CGTATCCAAC AATAGGAGCA
GCTACGGCAA CGATTACGGG GGACGACGGT GCCTTGAGTC GTGGTGCGAT TCCTCCGGCA
GAAATCCCCA TTGAATCGAG TCAAATATGC ATGACAACGC TCACCGACGC CAAGTCTACT
TCTCGCTGGC AGCGCTTCAT TCGATGGCGC AATTTTGACG GCATTCTCGA GCTCACCCAC
GCCAACAAGG CCCTCTACGC GCACAAGCAC GGGTACCGCT TCGTGGACGG CTCGGACTGG
ATCGATACGT CCCGGCCTCC GGCTTGGAGC AAGATACCAG CCGTGCAGCA TTTGCTACAA
ACCAACGAAT GCGAATGGGT GCTCTGGACC GATGCGGATA CCGTCATAAT GAACTCGGAT
GTACGCATAC AAGACTTCTT GCCGGCAGCG GGTTCCGGCA AAGACCTCAT GGTCGGTAGT
GACAACGGCG GTGGATACAA TTCCGGAGTA TTTTTGGTAC GCAATACACC CTGGGCGCAA
GAGTTTTTGC AGACGTGGTG GGATATGCGC AGCTTTGTGC GTCCATCCGG ACTGAGCCTG
TCCGGCGACA ACAACGCCAT GAAGGCCCTG TTACGGGAAA TGACGGATTT CAACGAACAC
GTCTTGTCGC CACCGCGGTG TACCTTCAAC GCGTTCGCCA AGTTCTTGAC CCTTTCTGAA
TCAGTCCACG TCTTGGACCA CTTGGACGAT CAGGAATGGT ACCTCAGCGA AAACTACTAC
CACAAAGGTG ATTTTATTGC GCATACACCC GGATACGATA ACAAGGCGGA ATGCTTACGC
ATGCTTTTAC AAGAAGCAAG ATGA
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| Protein sequence | MEIPDSMVVT QQPTSHLAKT RSLDALHPSG VSETFKNVSS PNTLNRFNPN FYKIGAFGTT
WLHSQTDTWL AFLTLFGWLA RTTNALPRGF LYVRMSVGTE TFVPPSPPPV FYGPDLHGTQ
KRNLHFYTHL SQSLTPHNQK EGDRDMARRE SKAHKVPLRT STNEWDEYSS VPVYHHHQRN
GPFWFTNRTQ SFDSDSHSMA VLAMENPQDP VGEQLLVQRS KQRFRWRTAA SNESRHDPMD
SYPTRRKPSR MLLYLRNRAN ASNVTVVGLG VLLAILSVHR VFSLYMTHRR WINAPITYMN
RQCPAPSYPT IGAATATITG DDGALSRGAI PPAEIPIESS QICMTTLTDA KSTSRWQRFI
RWRNFDGILE LTHANKALYA HKHGYRFVDG SDWIDTSRPP AWSKIPAVQH LLQTNECEWV
LWTDADTVIM NSDVRIQDFL PAAGSGKDLM VGSDNGGGYN SGVFLVRNTP WAQEFLQTWW
DMRSFVRPSG LSLSGDNNAM KALLREMTDF NEHVLSPPRC TFNAFAKFLT LSESVHVLDH
LDDQEWYLSE NYYHKGDFIA HTPGYDNKAE CLRMLLQEAR
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