Gene PHATRDRAFT_44338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44338 
Symbol 
ID7198030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp268287 
End bp269396 
Gene Length1110 bp 
Protein Length350 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178464 
Protein GI219115337 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.406283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGCTT CGTTGCGACA GCCCCAGGGC TACGCTAGCT TGTCCCCGGC GGCCTCGCCG 
ACGTCCCGAC GGCACGGGCG CCTGCCGATG TTCGTACTGG CACCCTGTCG CACCTGGGCC
AACAAATCGT GTAGCCGTCG TCTCTGGGAC ATTAGTAGAC TGGTTGCTGT CATTGTACTG
GTTGCCTACG GTATCCAGCG AACAATTGCC GGTTATCGGG GACAGCGTAC CTGGCTCCAC
GCGCCGATTA CGGCATTGGA ACGGAAATGC CCACCACCGG ACTATCCCAC GCTCCGGATG
CACGGGAATC AAACTGTTCC GGCGGCGAAA GTCAAGATTT GTCTCACCAC ACTAACGGAC
GAAAAGGAAA AACCTTGGTT TCAAAAACTC ATGGCCTACC GCAACTACGA TGGACTCTTG
GGCTTGACGT GGGATAACAA ACAAAAGTAC GCCGATAAGC ATGGGTACCA CCTGTACGAC
GAGAGCGCAT TGCTCGATAA GAAGCGACCA CCGGCCTGGA GTAAGATTCT GGCTGCACAA
CGACTCCTGA AAGAGGAATC CTGTGACTGG GTCGTCTGGT TGGATGCGGA TACCGTCATT
ATGAATTCGT CTAAACAGAT TGAAGACTTT TTACCCGCCG ATGCCGAGAA GGATTTTTTG
ATTGTGGAAG ACACGGGTGG TGGTTACAAT TCCGGTGTGT GGCTGATCCA CAAATCTGCA
TGGTCGCTGA AACTTTTGGA AGAATGGTGG GGGATGACTT CGTACGTGCG ACCGCCGGGT
TTCGCCAAGA GTGGGGACAA TTTTTCCTTG AAGAATCTAC TGGCCGACCG CAAGGACTTC
CGACAAAAAG TAGTCGTGCC GCCACGGTGT ACCTTCAATT CGTTCGCCAA GTTTGTTGCA
CCCCAGCACT ACGAAAAGGC TGTCACAAAC CTGCAACGGC AAGAGTGGTA CATGAACGAA
GCCTACTACC ACAAGGGAGA TTTTATTGCC CACGTGGCTG GTATGGACAA CAAATACGAA
ACGTTGGCAA TGCTGCTGGA AGAGGCAGTC TAGTTGTAGA TACTTGGCTA AATTTTGAGG
ATCAGTTTCC GTGCGTTGCA AACGATGCAC
 
Protein sequence
MGASLRQPQG YASLSPAASP TSRRHGRLPM FVLAPCRTWA NKSCSRRLWD ISRLVAVIVL 
VAYGIQRTIA GYRGQRTWLH APITALERKC PPPDYPTLRM HGNQTVPAAK VKICLTTLTD
EKEKPWFQKL MAYRNYDGLL GLTWDNKQKY ADKHGYHLYD ESALLDKKRP PAWSKILAAQ
RLLKEESCDW VVWLDADTVI MNSSKQIEDF LPADAEKDFL IVEDTGGGYN SGVWLIHKSA
WSLKLLEEWW GMTSYVRPPG FAKSGDNFSL KNLLADRKDF RQKVVVPPRC TFNSFAKFVA
PQHYEKAVTN LQRQEWYMNE AYYHKGDFIA HVAGMDNKYE TLAMLLEEAV