Gene PHATRDRAFT_44256 details

Gene Information

• Locus tag: PHATRDRAFT_44256
• ID: 7197815
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: -
• Start bp: 22117
• End bp: 24249
• Gene Length: 2133 bp
• Protein Length: 541 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002178416
• Protein GI: 219115241

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCGAAAGCTG TCGACTTTGC TGAGAGGACG ATCGAACATC AAAGATAACT TCATAGTTGC 
GACAGTATCC AGCCGGCCGG TAGGCAGCTC TGTCTTCATC TGTAAGATGA CGACTGCCTC 
TGCGGGAACA GAAACAACGG GAATTGGATC GCTGACCACC ACACCAAGGC CTTTGCTACA 
CACGGAAGCT TCCGAAACGC CACCACGTCT CGATCGTGTT GGCGGAGACG GGGTCCCGAC 
TGCGTGCTCC GCTGCGGCGA AAACGCCCTG CGGGTTCGTG CCAGACCCGA ATTTCACGAG 
TCCCCGGGTC GCGAGCCATT CTGTTTCTAC GTCTATCCTA CGTAGGGCTG GTACAAAAGA 
TACCCTAGGC GCCACGTTCC CGGTGCCAGC ACGGCACACC CCCCACCACC ACGACCCTTT 
CGCCACTCCG AACACTGGTA CTAGTACTAT CGCTGCTGCT GCCAATGAAC CAGACAAGGA 
AAAGGGCGAT GATGGCATAA TCGATGAATC ATCCAGATTT GTGGTCACTG TTAGCGCTAA 
TCGCGACAGC TCGGACAACG ACTCCACTGG TAACCGCGGA GAAACTACCA GCAATTACAA 
CGAGAGCATC ACCAACTACG GGACGGAGCG TAAGCATAAC TTCTCTTTCT CTAGACATCA 
GTTGGAACAA CAAGCTTCCA CTCTACTTCT TGATACAGGA CAACCGCTTA TCTCTACCAA 
CAGCACGGAA TCTCCAATCC AAACCACAGC TAATACACCT TTCACCAGTG CAAACTCGTC 
TGCATCTACA GTTGCAGAGT TAGTTCTACC GGCAAGCACC TATTTCAGCG CCCACGTCGC 
CGCCAACATT CACAAGGAAC TTCGGAGCAG TGTTGGCGTT CAACAGAGCA GTAGACACAA 
CGGGATCCTA TCAATCTCTT TCGATAGCAA GAATCCTTCG GAAAGGGTAT CAACCACCGT 
AGTACCGCGT TGTACTGGAC CGGGAGGCCA CGATCCTTCC AGCGTCGTAA TGTCTATTCA 
CAATCAATCA TCTCCGAACG CGTCCTCGAG AGGCAAGAAG CGGCGGCCCT GCGGAACTAC 
CGAGGGTCAA ACATCAGGTC GCTGGACAGA TCAAGAACAC CAGACCTTTT TGATGGGTCT 
AGCCAAGTAC GGACGGGAAT GGAAAAAGGT AGCTTCGCAC ATTCCGTCCC GGTCTTCCGC 
GCAAGTTCGT TCGCACGCAC AAAAGTATTT TGCCAAGTTA CAGCGCGAAG AAGAAGAATT 
CATGCAAGCT CAAGAACAGC AGCAGCATCA ACAACAACAC GGGCATCCGG ACGAAAATGT 
GCCAAACATG CTAGACGAAA CAACCGTCAC CACCTCTATC ACTGGATCTG GATCGGAGGC 
CGCTTCATTA TCTCAAGTGC TGCTCTCCGC TAACGTCCAG GCCAATGTGG AACGAATTCT 
TGCCAAGCCC GACACTGTTC AAGCCGAAGT TCAAGCTACC TTGGAACGTC TACGTCGTCG 
GTATCATGCA CTTCAACGGC GTTTAGAACG AACCGAAAAT CACAATGCCG TACTGAACAA 
GCACGCAGCC ATTCAAGATT ACAATAGTAC CACCGATGAC CACGAGGATG ATGTTTCTCG 
CGAAAGCAGT ACACTCAGCA GTTTGCAAAA TGAAGAGCTG ATTGCGGTTT CCGTTTTGCA 
CGCGTCGTTG CCCCGCGGCG ATCCAACTTC ATCGGAACAC ACCTACAGCA AATACCATTA 
CGAACCGCCT GGATCGCTGT CGTCTTGCTC GGACACCTCC AAACGAGCAC GGTTTGAATA 
AGCGTGCAAA CCAAGGCTTT TCCATCGAGT TTAACCCCAG CGAAAGTCAT CCGTACCACG 
ACCAGTCCAA CACCATACAA CAATTTTACC CTTTCTTGAA CAAATCTTCT CACACACATG 
ACGTGTAAAT ATCACATCGC ACGACGAAGA CCAATATCCG ACCGGGATAA CTCTTCTGTC 
ATGCTCACAG TCAATCGTCT TTGTACTCCC ACGCTGCACC ATATTCCAAT TCCGTGTACC 
ACTCAACTTT TCTCATCTAG ATCAATAACA ACACTCTGTT GTCGGACAAA TTAGCCATTA 
ATCAGTACCA TATAGTATTC CACTAATCAT GAT 

 

Protein sequence

MTTASAGTET TGIGSLTTTP RPLLHTEASE TPPRLDRVGG DGVPTACSAA AKTPCGFVPD 
PNFTSPRVAS HSVSTSILRR AGTKDTLGAT FPVPARHTPH HHDPFATPNT GTSTIAAAAN 
EPDKEKGDDG IIDESSRFVV TVSANRDSSD NDSTGNRGET TSNYNESITN YGTERQPLIS 
TNSTESPIQT TANTPFTSAN SSASTVAELV LPASTYFSAH VAANIHKELR SSVGVQQSSR 
HNGILSISFD SKNPSERVST TVVPRCTGPG GHDPSSVVMS IHNQSSPNAS SRGKKRRPCG 
TTEGQTSGRW TDQEHQTFLM GLAKYGREWK KVASHIPSRS SAQVRSHAQK YFAKLQREEE 
EFMQAQEQQQ HQQQHGHPDE NVPNMLDETT VTTSITGSGS EAASLSQVLL SANVQANVER 
ILAKPDTVQA EVQATLERLR RRYHALQRRL ERTENHNAVL NKHAAIQDYN STTDDHEDDV 
SRESSTLSSL QNEELIAVSV LHASLPRGDP TSSEHTYSKY HYEPPGSLSS CSDTSKRARF 
E