| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43746 |
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| Symbol | |
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| ID | 7197031 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 1358780 |
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| End bp | 1362168 |
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| Gene Length | 3389 bp |
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| Protein Length | 954 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178125 |
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| Protein GI | 219112747 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.213644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCTCTTACA TCGCTCTGGA AAAGCAGCTC TAGCGTCCTG AGCCGAAAGA ATTAGCGTAG
CTCGGAATAC CTGTCCTTCT CTTTTGAACC GCTTCCATGC TTGCCCATCA AGAGGATCGA
CCCCAACCGA CGCGGAATGC CTCGCAAAAC GTTTCGTCGG AGCGATTACG ACTGACGGAA
GAGGAGGTCG ATGCCCTGAT TGAAAATTTC GCCAAGGAGG ACGACTTGAC ACGTAAGACA
TGGACACGCC GCGTCGTGGA AAATTTCCTC ATGAAGGTAC GAGTAGAGCA TTCGAATAAA
ATAAATCGGA TCGACAGACT TTGTTGTTCT TGGAAATGAT TTTCGGCTCA CTGCTTTGTG
TTCTGTTTGA TTCTCACAGT ACAAGTGGTA CTTCCCCCGC CGCGATATCA AGGGTGCTCC
TTCGTTGAGT ATGGCGTATG CGTACTACGA GCATATTACA CTCCCCCGGC ATTTTGCCGG
CGGGGAACAA ACGGCAGAGC ATGTTCTGCG ACGGGCCGAA CCTGGGGAAT CGCAAAGTAC
GGATCTATAC AATCCACTCA AGACACCGTC GTCTTCCTTT ATTGAGTACG TAGTGTTCGA
CGCATGTATG GATCGGCGCC TGGCTTTATA CATCTGGCAT TCCCTGACGT GAGATCTTAC
TCCTTGTAAT TTCTTTTAGA TGGGGCATTG GTGTGGATCT ATACTTTTCC AGTGTGCGAA
TTATGTCGAT GATTCTCTTG CTGGCGGGTC TGCTCAATAT CTACAGTATT TACTACTACG
GTTCTACGGA ATACTCGCCG AACGGAAAGA ATTCATTGTC AACCTTTTCG CTAGTCGGTA
CCGCCATTTG CACCACCGGC GACTGGGTTG TCTGTGCAGA AGGATGCACT CAGGAAGGTT
ACTCCTCCGA AGGAGAAGAC GACCGTTTTG GTATTGCAGA CGACGGAACA GTTTTGGTCG
TTCGCAATGG CTGCGACGAC GGGAGCTTCC TGCAAAATGG AATGGTCAAT TGGATTACTC
TTTTGTTTTT GGGTATTCTA ATGGCTTTGG TGTCGCTTTA TCTTAAAGCT CGTGAAGTTC
GATTCGACGA GGACAAGTGA GTGAAATCTT CATTTTGTGA TTTGTTTGTC TGCATTTGAT
TTTGGTTTTG CTAACTCTTT AATCTATAGA TTAACGTCGA CGGATTATTC CGTCATCGTC
AAGAATCCTC CTCCTGATGC ATACGATCCG GATGAGTGGC GCGATTTCTT TGCACAATTT
GCGGAAAAGC AGGTAACAGT GGTTACCGTA GGGTTAAACA ACGAGTCGCT TTTGAACCTA
CTGCTGGCGC GTCGTGTTCA CCGGCATAAT TTGCGGCTTA TGCTGCCGAA AGGAACCGAC
ATGGATGATG AGGACCAGGT CCGTTCAGCA GTAGCCCGAC TGATTCAAGA CCGAGAAGCC
GAGCCTGATG GTTGCATCAT GCGCTTCTTG GGATGTGCGG TATTTCCTTT TCTGCGAATC
TTCAACATGT TCTTGCCGCC CGAAGTTTTG GTGGATCGAG TCTTCCGTTT GACCGACCAA
ATCAAGGAGC TTCAGGGGGA GAAATACACG GTGTCGAACG TCTTTGTCAC GTTCGAAACC
GAGGAAGGAC AGCGCGCGGC TCTTGCAGCT CTCTCTGTGG GAAAGCTTGA CGCAATCCGG
AACAACACGG CCAACTCTGC CCCTAGTGCC ATTTTCCGTG ACCGTGTTTT GAAGGTTGAA
GAGCCAACCG AACCAAGTGC TGTTCGCTGG ATGGATCTCA GCGCCTCGAC GTTGCGAAAG
ATCATTCTCC GCATATTGAA TTTGCTCATT ACACTGGGTG TCGTTTCTTT TTCTGGATAC
TTGGTAGCAA AAGTTCGTGA AAACTTGGGG CCTGGATACT CTGGCCCTTT GGTTTCCGTA
TTCAATTCGA TTATTCCACA GATCGTCAAG CTCTTAATGA TCTTCGAACC CCATACCACC
GAAGGGAGCT TCCAAACCTC TCTGTACTTG AAGATTACTC TCTTCCGTTG GGTGAATACG
GCCGTCCTTA CGAAATTAAT CACTCCTTTT ACAAGCACCG TTAGTCCTGA AAGGACCAGC
GTCTTGCCGA CAATCAATTC CATTCTGTGG TCCGAGCTAT GGCTAGTGCC TGGTCTACGT
TTATTGGACC TTTGGGGTAA CATCCAGAAG CATGTGCTTG CTCCACGTGC TCGAAACCAA
GAACTTATGA ATTTGAATTT CCAAGGCACG TTCTATAACC TCGGTGAGCG GTACACAGAT
TTGACGAAAG TGCTCTTTCT TTGCTTTTTC TATTCAGCGT TATTTCCGTC GACCTTCTTT
TTCGGTGCGG CAATTCTCTT TGTTCAATAC TATGTAAGTT GTGTACTGCT CAAATTACAG
CCATTCTTGC CTTCGACTTC TCACGGATAC TTCAACCATT GCTATAGACC GACAAATACT
GCTTGATGCG CATCTGGGCA TGGCGACCAT TCATAGGGCC AGAGCTGGCA CGCTTCAGTC
GAAGGTATTT TTTTTCTGGG AGCGTCTTGG CCTTTGCTTT AGTAAGCGCG TACACCTGGG
CTCAGTTCCC ATACGACAAT GTTTGCGATC CAGATACACC CATCTTTACC AACGCAGCAA
GAGAATACTT CAATGTACAA TTCGCAAACT CCTCTACTGC CGACGTTGTC ACCGTTTCAC
AGGACACTCC AGTTGTAGCG TGCAGCCAGA GTTGGCGAGA AGTCAGTGGT TTTTCCTTTC
CTCCAACAAA GCGCATCCAG CCGGTTGGAT TAAGTTGGAT GAGCGACTCA CAAGAGACGC
TGACGAGCGT CTACGGCTGG ACAGCCGTTG CACTTCTTGT CGGCTTTCTT GTTTTCTTTT
TTGGTTCTTC GACCATTAAC TTCTTGTTGT CCTGGTTTCG TGGCATATAT CATACCAGTG
GTCAGAATCA GCGAATCGAT TTCAGCACTA ACCTGGAAAT TTTTGCTTAT GTCCCGCAAG
TCAAGCTGAA ATCTTTACCT TTTCCTCTCT TAGCTTGTAA CGTCGACAAT ATTGACAAGG
GTCTAATTGG TTGGAACGAC CCCGCACATT CATATGATGT TCACAACATG ATTTTCGACG
TTCCCTGGCA AGGAATGCCA AGGCAAAAAG CTGTTGAGAA TGAAGCGAGT ACAAGGGGGA
GCGTTCTTGG AGCCGAACAA GAAGAGGTTG GAGGAAATCA AAATTCACCG CAAGCCTTGC
CCAATGCGCT CGAAGTGAGA ACAGGGCAGC CTCCAATCTT TGCGGTTGTG AAACACTATC
CGCCCGAATG GAGACAGCGC GAGCTAAAGC TGTCCTAGCG CTTCGCTTTT GCTGTAATCG
CTTCTAGTTT AAACACACTT GTACTCACC
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| Protein sequence | MLAHQEDRPQ PTRNASQNVS SERLRLTEEE VDALIENFAK EDDLTRKTWT RRVVENFLMK
YKWYFPRRDI KGAPSLSMAY AYYEHITLPR HFAGGEQTAE HVLRRAEPGE SQSTDLYNPL
KTPSSSFIEW GIGVDLYFSS VRIMSMILLL AGLLNIYSIY YYGSTEYSPN GKNSLSTFSL
VGTAICTTGD WVVCAEGCTQ EGYSSEGEDD RFGIADDGTV LVVRNGCDDG SFLQNGMVNW
ITLLFLGILM ALVSLYLKAR EVRFDEDKLT STDYSVIVKN PPPDAYDPDE WRDFFAQFAE
KQVTVVTVGL NNESLLNLLL ARRVHRHNLR LMLPKGTDMD DEDQVRSAVA RLIQDREAEP
DGCIMRFLGC AVFPFLRIFN MFLPPEVLVD RVFRLTDQIK ELQGEKYTVS NVFVTFETEE
GQRAALAALS VGKLDAIRNN TANSAPSAIF RDRVLKVEEP TEPSAVRWMD LSASTLRKII
LRILNLLITL GVVSFSGYLV AKVRENLGPG YSGPLVSVFN SIIPQIVKLL MIFEPHTTEG
SFQTSLYLKI TLFRWVNTAV LTKLITPFTS TVSPERTSVL PTINSILWSE LWLVPGLRLL
DLWGNIQKHV LAPRARNQEL MNLNFQGTFY NLGERYTDLT KRYFRRPSFS VRQFSLFNTI
HSCLRLLTDT STIAIDRQIL LDAHLGMATI HRARAGTLQS KVFFFWERLG LCFNTPIFTN
AAREYFNVQF ANSSTADVVT VSQDTPVVAC SQSWREVSGF SFPPTKRIQP VGLSWMSDSQ
ETLTSVYGWT AVALLVGFLV FFFGSSTINF LLSWFRGIYH TSGQNQRIDF STNLEIFAYV
PQVKLKSLPF PLLACNVDNI DKGLIGWNDP AHSYDVHNMI FDVPWQGMPR QKAVENEAST
RGSVLGAEQE EVGGNQNSPQ ALPNALEVRT GQPPIFAVVK HYPPEWRQRE LKLS
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