Gene PHATRDRAFT_43651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_43651 
Symbol 
ID7197362 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp1104987 
End bp1106723 
Gene Length1737 bp 
Protein Length520 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178074 
Protein GI219112645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCTTCCTTTT GCTCCGCATA GACATCGTTC GCGGTTGTAT TCTACGATTC CTTCGTGGGA 
AACCCGAAGA TCGAGCCGGG AACTATGACG TCAAATATAA AAGGCGGTCA GCCCATTATA
AACCAAATAT CTCGAGCGCA ATGTGTTCAT GTAGGTTAAG TTGAACAAGT CGAACGGCCG
CGGAAATGTT CCTTTTTCAG TTACTCATTC TACTTGCTGA TTCTTCTTTG TGACATGTAG
CTTCGGCGTA TGGATGAAGG CACCGCCATG CCATGGGGGC AACGTCTGAA AACCAAATTT
TTAAACGTTT TTTCTAAGAG CGAAGAACAG TCGGAGGACG TGGAAGCATC GAACCAACAT
CAACAAACGA AGCAGTATCG TCTAGAAGCC ACCCGACGAA GCCCTCAACA GTCTCTGTTT
TGGAAAATCA CGACGTGCAA CGGAAGAATT GGCTCACCCC GCCGTTCGAC TGGTCTCGCC
ATTGGCATAA ACCCCAACCA AAAACTTGCG ATGTATTTGC ATTGGATGTT CCGTGTCAAT
TTTCTATTCT TGTTCGTGGT CATGTGTGTA ATGTTTTTTG CTCTCGTGAT TCTATTTGCG
GGGTTCATAA CCATGGCCGG TAGAATTGAT GAGGAATGTG TACGAATTGG CGGAGAGCTC
TTTGCGTCCA CAGACGCAGC CTTTGCTGAT GCCTTCGCCT TGTCGTGGAC AACTTTTTCG
ACCGTCGGAT ATGGTTCGAC GGCGCCAGCT TTGAGCTACC AAAACTCGAG CCCAACCCAT
TGTTTCTTTA TCAATTTTAT ATGCTCGCTC GAAGCTTTGT TGGGGGTGTT ATACTCTGGC
TTTTGTGGCG CAATTTTGTT TGGCAAAGTA TTGCGTATTC AGTCACACGC ACAAGTGATC
TTTAGTGATC CGATTGTTAT TCGGTTTGGT CCTGGGGTAC GGCGAAACAA CGATTTTGAT
CCCAATCACG GGCACGACGA ATCTTCGGAC GACGAAGAGA AAGAGCCCTG TCCGGTGTTG
GAATTTCGAA TCATCAATCG ACTCTACAAT GAAGTTGGTG GCGAAATCAT GGACGCAACC
CTGAATGTCG TTGCCAATGT CGATGCGAGT GATGCCGATC CCTCCTTACA GGAGTCTTTT
GAAAATGACC GGAATTCGGC CGCCCAAAGC ATTTCAGGTG AAACTGCGAG TGACACAAGT
AGCATAGCAG AATCGACGAG ATTCGATTTG TTGACATCTG TTATCAGTCG AAATTTTTTG
GGTCGTTATC ATCGCCGTGA TCAGCAAGCA TTGGATGAAG ACCCGTCGGC AAGGCTTGTT
AGTAAGCAGA TATTTTCCAA GATGGTGATC GAAGCCTCGG ACCACCCGTT TTTTAAGCGA
GTCTGGTTGG CACGCCACGT CCTTGACGAG CATTCCCCCC TATTGAAACC CCGACTGCGT
CGACAGATTC GTCGACACGG TGGTTCCTGG CCATCGCGTC TCAACAACTG TGACGATGTT
CGAGAATCTC TTCAATTCAA CCAAGTTTTA GTCTCATTGA ACGGTGTTTC GAACGTCTCA
GCGTCGGATG TTTACGCTCA AAAGATTTAC GACTTTGTGG ATATAAATAT TGGCTATCAG
TTTGTGAATA TTCTCTATCG TGATGGGGAT GGCTCCCTCG GTGTTGATAC GGATTTAATC
AATGACGTAC GGGAACAAAA CGGAGGTGGA GGCGAGACGC TGATTTTCGA CGAGTAA
 
Protein sequence
MTSNIKGGQP IINQISRAQC VHLRRMDEGT AMPWGQRLKT KFLNVFSKSE EQSEDVEASN 
QHQQTKQYRL EATRRSPQQS LFWKITTCNG RIGSPRRSTG LAIGINPNQK LAMYLHWMFR
VNFLFLFVVM CVMFFALVIL FAGFITMAGR IDEECVRIGG ELFASTDAAF ADAFALSWTT
FSTVGYGSTA PALSYQNSSP THCFFINFIC SLEALLGVLY SGFCGAILFG KVLRIQSHAQ
VIFSDPIVIR FGPGVRRNND FDPNHGHDES SDDEEKEPCP VLEFRIINRL YNEVGGEIMD
ATLNVVANVD ASDADPSLQE SFENDRNSAA QSISGETASD TSSIAESTRF DLLTSVISRN
FLGRYHRRDQ QALDEDPSAR LVSKQIFSKM VIEASDHPFF KRVWLARHVL DEHSPLLKPR
LRRQIRRHGG SWPSRLNNCD DVRESLQFNQ VLVSLNGVSN VSASDVYAQK IYDFVDINIG
YQFVNILYRD GDGSLGVDTD LINDVREQNG GGGETLIFDE