Gene PHATRDRAFT_43395 details

Gene Information

• Locus tag: PHATRDRAFT_43395
• ID: 7197130
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: -
• Start bp: 335076
• End bp: 337431
• Gene Length: 2356 bp
• Protein Length: 385 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002177913
• Protein GI: 219112323

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0319508
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCTGTACGGT CCATCAGAAA AGGCGACGAC CACTAATTCT ACCGTGAAAC AAACGCCTAC 
TCACATCGCA TGACACCAGT AAATTAAGCA ATGCAAACAA GTAGTCGCCT TCAACGCTTA 
GCGCATGACA ATGATGTGAC AAGCTTGCAG CAGGATGATG ATCACCTGGA CGAAACTCTC 
GCAATGCGTA AGCAAGCTAC CAAACAGATA CAAGAAGCCA TGGAATTCGT CAAAGATAAG 
GAGGATTACG AAGAGGCTGT CCGTCTCGTC CCAGACATAG TCGAGGCCGA AACGCACGCG 
TGCTTGTTTA TGCGCCGTGA AGACTTTAAC GCTTGGGCCG CCGCTACTAG ACTCGCGATT 
TACTGGAAGA CGAGACGAGA AACGTTTGCG GAGCGGGCTT TTCGGGCCAT GTTTGATTTA 
TCTGGAGGTG GATGCTTAAA TAAAGAAGAC GTGAAGGATC TCAAGACAGG TCTTGTTGCA 
CGCCTTCCTG CGGACGCCAG CGGCCGTTCC ATTTACTGTA TCGATCACGC TAGAATGGCT 
GGACCAGAGA GCGTGGTAAA TGAAAAGAGA ATACGCTTTT TGTTCTTTTG GATTTCCCTG 
GCGGGTCAGA ATCGGAAGGC GCAAAAAAAC GGAGTGGTCT TTTTGCGAAT TATGGACCGT 
CCCGTAGTGG ATAGGAGTGC CAACAATCGG GTTCTTCATT TTATGAGCAA TGGAATGGCT 
GTGCGGATCG AAGGGTTCCA TCTTATTTAC ATCCCACCGA CAGCTAAAGC GCGAAGATAT 
TCTGACAATC TGGTTACTTT ACTGCTTCAG ATCTTGAAGC AAGCCTTGGG TGATCGCGGA 
AATTTGCATA TTGGGTACTC GGGCATTGAA GTTCTTCCAC AGCTCTTACC GTATGGCTTG 
GAAGCGGAGG GGTTACCAGC TACACTGGGT GGCAGCTGGA CCTACGACAA ACTTGAAGCG 
TGGATCAAAT ACCACCAAAT GGTATATCAA GCTCCCGGGA AGAAGCCAAA ATCAAACAAC 
CTTCCAACCA TCAAAGGGCA AGCAGTCCTC AGATCGACGG GGACTAGAAC TTCAACCAAC 
ATTTCGCAGT CATCTCCTTT TCCAGCAGTA CAGTCCAACG ACCGCATGGT ACACAGAATT 
AGAACTTTTA AGTTCCGGGT TCAGCGCCGA AAAAGCGTCA AGCAAAAGAT CGATTCAGTG 
GGCGCTCGAT ACCGCCGTGG AATAAAACTC AACCCCACCA AAACATAAGC AATTGTCTCT 
AATGCAACGA CACCATGCAA GCGAGTCATT CAATTACCTT TCTTAGCGTA CATGATGTTG 
ACAAGTGATC GGAGAACCTT TCTTACAAGA ACCAAAACCG ATTCAGAGTC AAAACTAGCT 
TTTAGTGTGA TTGACAGGGC ATGGCTAAAC ATGAAAAAAT GGACAGTATT GTAAGGATAG 
TTGTGTAGAG GGCCAATGGC CGTTTGTTAT GTAAGGACAA AAATTCTCAG CGCTCTTCAT 
TTTGTTGCTC TCACTTGGAC AGTCCTAGCT CCACAGAGAA TCCCCTCTGT TACGATATAC 
ACCAATGTAC ACCGTATGGA CAGAAGCGCT GTTAGGAACA GAGCCTGGTA AACAAGAGAG 
GGCGTTATTA CGAACGACCG GCGATACACC TAAGAGACTT AGGGACTGTA AAACTCTACT 
CGTTGGCGAC GCTCCCCTCG GGTTAGGCAG CGGATACGAG GACCTATGCG TAAACTAGCA 
ATGCGGATCA AAGAACTTAT AAAACAATGA TTGAAGAATT AGTGCTATAA ACTAGTTCTC 
GTTGCTTCTC CGATTTGCCA ACAAAACAAC AAAACTGAGA AACAAACTCA ACCGTACACA 
AATATCTTTC TTCGGTCATA GTATTCCTAT ACCATGACCC GCGCTCACAT ATACTTATAG 
TGACACCGAG AATACCTTCC ATAACATGCA TGCCGTGGAA AATGGAGCGC ATCCATTTAC 
ATCCGTTAAG CAGGCAATAA GTATTATCTG TCCCACTCCG TTGCCACCGT CAGAACACGA 
CACGTTCTGT CGCGTTCTCT CCAACGCTCG ATACATCATT GTATCTAGGG ACTCCATACA 
ATAAGACCGA ACTAACTCCC ATACGACTCA CTTCATTCTC AAGAACACTC CAACTGCCGT 
TCACCGTGTT GACATCCAAC TGACGGACAT CATTAGAAGA CATGTCGCAT GGTACTATAC 
CGTGACACCC TCGACCACAC ATTACCCACA CGGACAAGGG TGACAGCCGT GCCTTCTCCA 
TCCGCTTCTA GTACCAAGGT TGGGCGATGT CGGGATATTT ACAGAACATG CTGAGCGGAA 
CCAACGGAAC TTTTGC 

 

Protein sequence

MQTSSRLQRL AHDNDVTSLQ QDDDHLDETL AMRKQATKQI QEAMEFVKDK EDYEEAVRLV 
PDIVEAETHA CLFMRREDFN AWAAATRLAI YWKTRRETFA ERAFRAMFDL SGGGCLNKED 
VKDLKTGLVA RLPADASGRS IYCIDHARMA GPESVVNEKR IRFLFFWISL AGQNRKAQKN 
GVVFLRIMDR PVVDRSANNR VLHFMSNGMA VRIEGFHLIY IPPTAKARRY SDNLVTLLLQ 
ILKQALGDRG NLHIGYSGIE VLPQLLPYGL EAEGLPATLG GSWTYDKLEA WIKYHQMVYQ 
APGKKPKSNN LPTIKGQAVL RSTGTRTSTN ISQSSPFPAV QSNDRMVHRI RTFKFRVQRR 
KSVKQKIDSV GARYRRGIKL NPTKT