Gene PHATRDRAFT_43360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_43360 
Symbol 
ID7197402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand
Start bp242900 
End bp243724 
Gene Length825 bp 
Protein Length248 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177892 
Protein GI219112281 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCTT TTTCTTTATT GGTATTATTA TCCCTTCAAT GGCAGAATTC GGTCGGTTTT 
GGGACGCACG CCCCCTTGCG TACACTCCCA GTGGCTCGCT TGGCCAACAC GCGTTCCATG
TCGACCGCTG CGATTTCCGA CAGCAATGAC GAAACCGTGT TGAAACAGTT CGAAAAGAAA
GAGCTGCAGC TACTGAAACG CAAACAAGAA GCCCTTGCCA AACTGGAAGA ATATACCAAG
ACTTTAGAAA ACCTGCAGTC GCAAAAAGCC GAATACTTGG CTGCTGGCCA AGTAGCGGAT
GCCTCCGCCG CCGGTTCATT TTCGGAGACT GCCCTGCGCT CTGCAGTCAA AGCCTTTTTA
TGGCGAATCA TCGCCGGTTC TATTACCTTC GCAACAACTC TGCAATTTTC TGGATCCGTA
AAGACCGCGA TGCAGGTAGT GGCCGGTGAT TTCTTTTCCA AAGCCTTCAC CATGTTCATT
GGTGAGCGCC TCATGAACAA GTCGCAGGCT GGACGGAAAA AAGGAGCCGA CGATGTCGGA
CGGTCCTTCG CTAAGGCTCT CATTTGGCGG TTGTTTGCCA TTTGCAACAC TTTGACGATG
GCTGTCTTTA TTTCCAAGGA TCTGAGCGTG GCGTCCAAGA TTGCCAGCAC TGACGCCGTC
TTTAAGACGG CCCTCATGTT CTTTTACGAA CGCGTCTGGG CGAAAGTAAA GTGGGGCAAA
GACTATTTGC TGGAATTTTC TATCTGATAT GCCCCAATCG ATTCCACGGT GAAATGGGAA
AGGTGGCTGG CTCGTATGCA GGAGGCGGTT TTCTTGGACC TCATT
 
Protein sequence
MKAFSLLVLL SLQWQNSVGF GTHAPLRTLP VARLANTRSM STAAISDSND ETVLKQFEKK 
ELQLLKRKQE ALAKLEEYTK TLENLQSQKA EYLAAGQVAD ASAAGSFSET ALRSAVKAFL
WRIIAGSITF ATTLQFSGSV KTAMQVVAGD FFSKAFTMFI GERLMNKSQA GRKKGADDVG
RSFAKALIWR LFAICNTLTM AVFISKDLSV ASKIASTDAV FKTALMFFYE RVWAKVKWGK
DYLLEFSI