Gene PHATRDRAFT_43352 details

Gene Information

• Locus tag: PHATRDRAFT_43352
• ID: 7197102
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: +
• Start bp: 203132
• End bp: 205436
• Gene Length: 2305 bp
• Protein Length: 347 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002177577
• Protein GI: 219111651

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0470294
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTCAACTAGT ACACTGGAAC GAACCGCTTA CCGTTTCGTA CATTCCGTTC TCAGCATTAT 
CATGGTCAAG CATACAGTAT TTGGTGTGGA ACGGGACTTG GATATTCCCC ACCAAGTCTT 
TCCGAACGAA CAAGAACTCA CCGACATGGA AGCGGAACTG CCGGGTTGTC AGCACGGATG 
GTTCGAGTCG GTGCACGAAA GCGCACAGCT TCACTACCGC AAATTCTTAC CCGAAAACAA 
CAAACCACCC AAAGCGGTGG TTGTGTTCAT GCACGGTATT GCCACGCACA GTGGCAAAGG 
ATTCACCCTG AACGGACGGA AACTATGCAT GGCCTTGCTG TCGGACGCTT GCAACGCCCA 
AGACTGGGCG GTGTACGCTT ACGACTTGTA CGGACACGGT TTCTCCGAAG GCAAACGCTT 
TTTTATTCCT AATTCGTGGG AAACCAACCG ACAAGATTTG GTCAATTTTT GTAATCTAGC 
GGCCGAAGAC TACCCCGACG TCCCGCTTTT CATCGTCGGA GAATCGTACG GATGTACCCT 
GACCATTCTC GCCGCCAAAC AATTTCAGGA ACACCCCGAG ACGGGTCCCA AGAATTTTAA 
TTCGATTGTT CTCACAGCAC CCGCCATTAT CGGTGATCTT CCGCCTTATC CCGTGTACTT 
TACGCTACGC TACATTATGG CCCCGCTCTT TCCTTCGTGG CGTCCCTTTT TCATGCCCAA 
CCCTGTTTCG GCCGATCGCA TTTGGAGAGA TCCCGAAGTT TTGGCCAAGT GCTCCACCCC 
CCGCCAACGG TCCATGCAAA TTGACGGTTC CGGGTTGCCC TTCCGCCTCG GTACCGCCGT 
GAATCTCGTA ACGGCTTTGG AAGCGGTCCG TACCAAGGCC ATTCCCGGAT TCCGACTCCC 
CTACTGCATT ATTCACGGGA CAGAAGATTA CGGCGTGCCC ATTGCTGGCT CCGAGTACAT 
GTGGAAAACC GCTGTAACGC CCGCGACGTG CCGCGTCTTT CGACGTCAGC CCGGCGCCTA 
CCACGATCTA TTGAGTGACC CCACCGCCGA ACATACCATG CAAACGATAC TGGATTTTAT 
CCGAGCCCAA CTGTCCAAAA CATAGTTTTG TATGCACCCC GTTTCACACG TATAGGTAAA 
GAGACTGCGC TTTGTTGCAT AGGGAATGAT GACCTTTTGT TGCTCTCTGG CTCGGCCCTA 
TGTATTGGCC AGTAGACCCA TCACCTCTGC TATGTGAGAC GAATCTCCGC ATCTATACTA 
CTGCTACCAT TGTACACGTT GCGCCTAAAT CTGTGTTGGG ATTAAAATTA ATTTAGTTTA 
AACGATGATA TGCCGCCTTA CAAGACAACG AGTCTAGACG TTGAGCACTT TGCTACACGG 
CAATTTAAGG TTGGCTGGTC GAACTGGAGG TGACCACAGA GAAAGTTCCT GCCGTGGTGG 
CGTAAGCAGA CGACCCTGCT CCGGTGGTGC TGACATCAGA CCCTCCATCG CCTATGGTGC 
TCACATTGCC TGCGGAACCA GCGTTGTTGT CACCGGTAAA TGCTCCCTCA ACCAGGCCGA 
AACCAATGGC TGTCCCATTA TTCATGCTGT TGGCCGTTGA GTCAAAACTA CCGTTGTCAA 
TAGCGAGATC GACCGACCCT TGGGAACCTT TATCGACGCC GCCAACAACA ATTTTTTCCG 
TAGTCACCGC GTTGTCGAAA TCAACACTTC CAGAAAAATT GCTGCTACCT TCATTTAACG 
CGCCGGCCAA AGAGTCGGCG AAGACCTCAC CATTAAGACT TCCACCGAGA ACCCCGACCT 
CGTCAATTCC ATCAAAGTCG AAATCAATGT AGCTGGACGA GTTGGCGGTG GCCTCAACCG 
TACCGTTTGC CATCAATGTT TCAATCGAAT CAGGAGGGGT GGGCAAAGAT ACTTCCAAAC 
CTGAAGCCAT ATCTGATACT GTTTTGGTAG AAGCGTCGGC TTTCGAGGCC TTCCCAGAAG 
CCCTGTTATT CATCATTCGA TTGCGATTAC GATTGCGAGT TCCTCGGGAC ATCAATTTGC 
GTAAGCTTGG TTCTTCCTGG TCAACAAGTG GAGCTCGCAA GTTCGCTGCA TGGCTAATGG 
TAGCAGCGCA AGCGATGAGG ACACAAGCGA GCATCACTTC CGCGGATCTG CATGGTGAAG 
TGCAGCCGAT TAATAAGCGG AAGGGAAAGA TGAGTGGGGG ATCAAATCAA TGTAGTGTTC 
TCCCGTGTAT CGTTGTACGC ACCTTGTTCG CACTTGTTTG ATCATGATGA AATGTTTGAC 
AGTGAGAGTT TGGGTTGTGC TGGTT 

 

Protein sequence

MVKHTVFGVE RDLDIPHQVF PNEQELTDME AELPGCQHGW FESVHESAQL HYRKFLPENN 
KPPKAVVVFM HGIATHSGKG FTLNGRKLCM ALLSDACNAQ DWAVYAYDLY GHGFSEGKRF 
FIPNSWETNR QDLVNFCNLA AEDYPDVPLF IVGESYGCTL TILAAKQFQE HPETGPKNFN 
SIVLTAPAII GDLPPYPVYF TLRYIMAPLF PSWRPFFMPN PVSADRIWRD PEVLAKCSTP 
RQRSMQIDGS GLPFRLGTAV NLVTALEAVR TKAIPGFRLP YCIIHGTEDY GVPIAGSEYM 
WKTAVTPATC RVFRRQPGAY HDLLSDPTAE HTMQTILDFI RAQLSKT